Difference between revisions of "Ser D"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMN TMN] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiaminase * Synonym(s): == Reaction F...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ser__D ser__D] == * common name: ** D-Serine * Synonym(s): == Reaction(s) known to consume t...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TMN TMN] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/ser__D ser__D] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** Thiaminase
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** D-Serine
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[SERD_D]]
** 1.0 [[thm]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[4mhetz]][c] '''+''' 1.0 [[4ahmmp]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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== Reaction(s) of unknown directionality ==
** 1.0 Thiamin[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 4-Methyl-5-(2-hydroxyethyl)-thiazole[c] '''+''' 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c]
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* [[DSERDHr]]
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[EF2767]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
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* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
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** '''11''' reactions found over '''24''' reactions in the full pathway
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=D-Serine}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17509 17509]
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{{#set: consumed by=SERD_D}}
* BioCyc : META:THIAMINASE-RXN
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{{#set: reversible reaction associated=DSERDHr}}
* MetaNetX (MNX) Equation : MNXR104901
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* KEGG Reaction : R02133
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* EC Number : 3.5.99.2
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Thiaminase}}
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{{#set: gene associated=EF2767}}
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{{#set: in pathway=map00730|map01100}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 15:32, 21 March 2018

Metabolite ser__D

  • common name:
    • D-Serine
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links