Difference between revisions of "URIK3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_glu__L ExchangeSeed_glu__L] == * direction: ** REVERSIBLE * Synonym(s): == Reaction F...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIK3 URIK3] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine kinase (ITP:Uridine) * Syno...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_glu__L ExchangeSeed_glu__L] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URIK3 URIK3] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Uridine kinase (ITP:Uridine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[glu__L]][C-BOUNDARY] '''<=>''' 1.0 [[glu__L]][e]
+
** 1.0 [[itp]][c] '''+''' 1.0 [[uri]][c] '''=>''' 1.0 [[idp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ump]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Glutamate[C-BOUNDARY] '''<=>''' 1.0 L-Glutamate[e]
+
** 1.0 ITP C10H11N4O14P3[c] '''+''' 1.0 Uridine[c] '''=>''' 1.0 IDP C10H11N4O11P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 UMP C9H11N2O9P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0825]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 +
** '''22''' reactions found over '''72''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[manual]]
+
* Category: [[orthology]]
** Source: [[manual-import_from_medium]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=REVERSIBLE}}
+
* MetaNetX (MNX) Equation : MNXR105164
{{#set: in pathway=}}
+
* KEGG Reaction : R00970
{{#set: reconstruction category=manual}}
+
* EC Number : 2.7.1.48
{{#set: reconstruction source=manual-import_from_medium}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
+
{{#set: common name=Uridine kinase (ITP:Uridine)}}
 +
{{#set: gene associated=EF0825}}
 +
{{#set: in pathway=map01100|map00240|map00983}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:33, 21 March 2018

Reaction URIK3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uridine kinase (ITP:Uridine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ITP C10H11N4O14P3[c] + 1.0 Uridine[c] => 1.0 IDP C10H11N4O11P2[c] + 1.0 H+[c] + 1.0 UMP C9H11N2O9P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR105164
  • KEGG Reaction : R00970
  • EC Number : 2.7.1.48