Difference between revisions of "ADPDS manual"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GF6PTA GF6PTA] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamine-fructose-6-phosphate tr...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADPDS_manual ADPDS_manual] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GF6PTA GF6PTA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADPDS_manual ADPDS_manual] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Glutamine-fructose-6-phosphate transaminase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[gln__L]][c] '''+''' 1.0 [[f6p]][c] '''=>''' 1.0 [[gam6p]][c] '''+''' 1.0 [[glu__L]][c]
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** 1.0 [[n6all26d]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ac]][c] '''+''' 1.0 [[26dap_LL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 L-Glutamine[c] '''+''' 1.0 D-Fructose 6-phosphate[c] '''=>''' 1.0 D-Glucosamine 6-phosphate[c] '''+''' 1.0 L-Glutamate[c]
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** 1.0 N6-Acetyl-LL-2,6-diaminoheptanedioate[c] '''+''' 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Acetate[c] '''+''' 1.0 LL-2,6-Diaminoheptanedioate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF2151]]
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* Gene: [[EF1134]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[manual-4_newreactions]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways  ==
 
== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 
−
** '''22''' reactions found over '''93''' reactions in the full pathway
 
−
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 
−
** '''24''' reactions found over '''80''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
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* Category: [[manual]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** Source: [[manual-4_newreactions]]
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*** Tool: [[pantograph]]
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*** Comment: [[manual curation]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-l_plantarum_wcfs1]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR100107
 
−
* EC Number : 2.6.1.16
 
−
* BioCyc : META:L-GLN-FRUCT-6-P-AMINOTRANS-RXN
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glutamine-fructose-6-phosphate transaminase}}
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{{#set: gene associated=EF1134}}
−
{{#set: gene associated=EF2151}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=map01100|map01130|map00250|map00520}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=manual-4_newreactions}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction comment=manual curation}}
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 15:36, 21 March 2018

Reaction ADPDS_manual

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 N6-Acetyl-LL-2,6-diaminoheptanedioate[c] + 1.0 H+[c] + 1.0 H2O H2O[c] => 1.0 Acetate[c] + 1.0 LL-2,6-Diaminoheptanedioate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=ADPDS_manual&oldid=10819"