Difference between revisions of "PPM2"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD8 NTD8] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (dGMP) * Synonym(s):...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPM2 PPM2] == * direction: ** REVERSIBLE * common name: ** Phosphopentomutase 2 (deoxyribose) * Syn...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/PPM2 PPM2] == |
* direction: | * direction: | ||
| − | ** | + | ** REVERSIBLE |
* common name: | * common name: | ||
| − | ** | + | ** Phosphopentomutase 2 (deoxyribose) |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[2dr1p]][c] '''<=>''' 1.0 [[2dr5p]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 5-phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[EF0185]] |
| − | ** [[ | + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] |
| − | ** ''' | + | ** '''26''' reactions found over '''69''' reactions in the full pathway |
| − | + | ||
| − | + | ||
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230] | * [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230] | ||
** '''97''' reactions found over '''298''' reactions in the full pathway | ** '''97''' reactions found over '''298''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25205 25205] |
| − | * BioCyc : META: | + | * BioCyc : META:D-PPENTOMUT-RXN |
| − | * MetaNetX (MNX) Equation : | + | * MetaNetX (MNX) Equation : MNXR103116 |
| − | * KEGG Reaction : | + | * KEGG Reaction : R02749 |
| − | * EC Number : | + | * EC Number : 5.4.2.7 |
| − | {{#set: direction= | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: common name= | + | {{#set: common name=Phosphopentomutase 2 (deoxyribose)}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=EF0185}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=map00030|map00230}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}} | + | {{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:37, 21 March 2018
Contents
Reaction PPM2
- direction:
- REVERSIBLE
- common name:
- Phosphopentomutase 2 (deoxyribose)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 2-Deoxy-D-ribose 1-phosphate[c] <=> 1.0 2-Deoxy-D-ribose 5-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: EF0185
Pathways
- map00030: map00030
- 26 reactions found over 69 reactions in the full pathway
- map00230: map00230
- 97 reactions found over 298 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-e_coli_sstr_k12_substr_mg1655
- Tool: pantograph
- Source: orthology-b_subtilis_subsp_subtilis_str168
- Tool: pantograph
- Source: orthology-e_coli_sstr_k12_substr_mg1655
External links
- RHEA:
- BioCyc : META:D-PPENTOMUT-RXN
- MetaNetX (MNX) Equation : MNXR103116
- KEGG Reaction : R02749
- EC Number : 5.4.2.7
