Difference between revisions of "TRPTRS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SEPHCHCS SEPHCHCS] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-succinyl-5-enolpyruvyl-6-hy...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTRS TRPTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophanyl-tRNA synthetase * Sy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/SEPHCHCS SEPHCHCS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTRS TRPTRS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
+
** Tryptophanyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ichor]][c] '''+''' 1.0 [[akg]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[2sephchc]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[trp__L]][c] '''+''' 1.0 [[trnatrp]][c] '''=>''' 1.0 [[trptrna]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Isochorismate[c] '''+''' 1.0 2-Oxoglutarate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Tryptophan[c] '''+''' 1.0 TRNA(Trp)[c] '''=>''' 1.0 L-Tryptophanyl-tRNA(Trp)[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0448]]
+
* Gene: [[EF2228]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF2679]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
** '''23''' reactions found over '''49''' reactions in the full pathway
−
* [[map00130]]: [http://www.genome.jp/dbget-bin/www_bget?map00130 map00130]
+
−
** '''9''' reactions found over '''40''' reactions in the full pathway
+
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* Reactome : REACT_R-HSA-379977
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25593 25593]
+
* MetaNetX (MNX) Equation : MNXR104948
−
* MetaNetX (MNX) Equation : MNXR104329
+
* KEGG Reaction : R03664
−
* KEGG Reaction : R08165
+
* EC Number : 6.1.1.2
−
* EC Number : 2.2.1.9
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase}}
+
{{#set: common name=Tryptophanyl-tRNA synthetase}}
−
{{#set: gene associated=EF0448}}
+
{{#set: gene associated=EF2228|EF2679}}
−
{{#set: in pathway=map01100|map00130|map01110}}
+
{{#set: in pathway=map00970}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:40, 21 March 2018

Reaction TRPTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tryptophanyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 L-Tryptophan[c] + 1.0 TRNA(Trp)[c] => 1.0 L-Tryptophanyl-tRNA(Trp)[c] + 1.0 Diphosphate[c] + 1.0 AMP C10H12N5O7P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-379977
  • MetaNetX (MNX) Equation : MNXR104948
  • KEGG Reaction : R03664
  • EC Number : 6.1.1.2




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