Difference between revisions of "ExchangeSeed btn"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGCD PGCD] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoglycerate dehydrogenase * Syno...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_btn ExchangeSeed_btn] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGCD PGCD] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/ExchangeSeed_btn ExchangeSeed_btn] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
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** REVERSIBLE
* common name:
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** Phosphoglycerate dehydrogenase
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[nad]][c] '''+''' 1.0 [[3pg]][c] '''=>''' 1.0 [[nadh]][c] '''+''' 1.0 [[3php]][c] '''+''' 1.0 [[h]][c]
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** 1.0 [[btn]][C-BOUNDARY] '''<=>''' 1.0 [[btn]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 3-Phospho-D-glycerate[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 3-Phosphohydroxypyruvate[c] '''+''' 1.0 H+[c]
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** 1.0 Biotin[C-BOUNDARY] '''<=>''' 1.0 Biotin[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF2901]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
* [[EF3141]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''104''' reactions found over '''715''' reactions in the full pathway
 
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
** '''45''' reactions found over '''220''' reactions in the full pathway
 
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
** '''56''' reactions found over '''228''' reactions in the full pathway
 
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
 
** '''18''' reactions found over '''75''' reactions in the full pathway
 
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 
** '''23''' reactions found over '''133''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''135''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[manual]]
** Source: [[orthology-l_plantarum_wcfs1]]
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** Source: [[manual-import_from_medium]]
*** Tool: [[pantograph]]
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*** Comment: [[added to manage seeds from boundary to extracellular compartment]]
 
== External links  ==
 
== External links  ==
* EC Number : 1.1.1.95
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{{#set: direction=REVERSIBLE}}
* BioCyc : META:PGLYCDEHYDROG-RXN
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{{#set: in pathway=}}
* MetaNetX (MNX) Equation : MNXR102527
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{{#set: reconstruction category=manual}}
* RHEA:
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{{#set: reconstruction source=manual-import_from_medium}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12641 12641]
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{{#set: reconstruction comment=added to manage seeds from boundary to extracellular compartment}}
* Reactome : REACT_R-ATH-977348
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* KEGG Reaction : R01513
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phosphoglycerate dehydrogenase}}
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{{#set: gene associated=EF2901|EF3141}}
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{{#set: in pathway=map01100|map01120|map01200|map01230|map00680|map00260|map01130}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 15:46, 21 March 2018

Reaction ExchangeSeed_btn

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 btn[C-BOUNDARY] <=> 1.0 btn[e]
  • With common name(s):
    • 1.0 Biotin[C-BOUNDARY] <=> 1.0 Biotin[e]

Genes associated with this reaction

Pathways

Reconstruction information

External links