Difference between revisions of "BG MBDG"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212] == * common_name: ** Fatty acid metabolism * Synonym(s): == Reaction(s) found == *...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] == * direction: ** REVERSIBLE * common name: ** Orotate phosphoribosyltransferase * Syno...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ORPT ORPT] ==
−
* common_name:
+
* direction:
−
** Fatty acid metabolism
+
** REVERSIBLE
 +
* common name:
 +
** Orotate phosphoribosyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''36''' reaction(s) found
+
* With identifiers:
−
** [[3HAD120]]
+
** 1.0 [[ppi]][c] '''+''' 1.0 [[orot5p]][c] '''<=>''' 1.0 [[orot]][c] '''+''' 1.0 [[prpp]][c]
−
** [[3OAR60]]
+
* With common name(s):
−
** [[EAR60y]]
+
** 1.0 Diphosphate[c] '''+''' 1.0 Orotidine 5'-phosphate[c] '''<=>''' 1.0 Orotate C5H3N2O4[c] '''+''' 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c]
−
** [[3OAR80]]
+
 
−
** [[3HAD140]]
+
== Genes associated with this reaction  ==
−
** [[3HAD100]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [[3HAD160]]
+
* [[EF1712]]
−
** [[EAR120x]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
** [[EAR120y]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[3OAR160]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
−
** [[ACOATA]]
+
== Pathways  ==
−
** [[EAR60x]]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** [[3OAR120]]
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
** [[MCOATA]]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** [[3OAR100]]
+
** '''82''' reactions found over '''244''' reactions in the full pathway
−
** [[KAS15]]
+
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
−
** [[KAS14]]
+
** '''22''' reactions found over '''72''' reactions in the full pathway
−
** [[3OAR140]]
+
== Reconstruction information  ==
−
** [[3OAS100]]
+
* [[orthology]]:
−
** [[ACACT1r]]
+
** [[pantograph]]:
−
** [[EAR40y]]
+
*** [[e_coli_sstr_k12_substr_mg1655]]
−
** [[3OAS80]]
+
*** [[l_plantarum_wcfs1]]
−
** [[3OAS160]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
−
** [[EAR140x]]
+
−
** [[EAR140y]]
+
−
** [[3OAS120]]
+
−
** [[3HAD80]]
+
−
** [[3OAS60]]
+
−
** [[EAR100x]]
+
−
** [[3OAS140]]
+
−
** [[EAR40x]]
+
−
** [[3HAD60]]
+
−
** [[ACCOAC]]
+
−
** [[EAR100y]]
+
−
** [[EAR80x]]
+
−
** [[EAR80y]]
+
−
== Reaction(s) not found ==
+
−
* '''146''' reaction(s) not found
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HAD120_1 3HAD120_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HAD80_1 3HAD80_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOA140OR ACOA140OR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR120x_1 EAR120x_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOATA_1 ACOATA_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH6m ECOAH6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAR160_1 3OAR160_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/PTE2x PTE2x]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FACOAL160 FACOAL160]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT4r ACACT4r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT4p ACACT4p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT4m ACACT4m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAR7m ACOAR7m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD2f ACOAD2f]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH6p ECOAH6p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT3m ACACT3m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MCOATA_1 MCOATA_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAR ECOAR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT3r ACACT3r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH2_1 ECOAH2_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR80x_1 EAR80x_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR60x_1 EAR60x_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/KAT1 KAT1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH5m ECOAH5m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH5p ECOAH5p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR100x_1 EAR100x_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAR6m ACOAR6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAR80_1 3OAR80_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1x ECOAH1x]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR120y_1 EAR120y_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAR5m ACOAR5m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1m ECOAH1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/C160CPT2 C160CPT2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAS140_1 3OAS140_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOA120OR ACOA120OR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAS60_1 3OAS60_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT6p ACACT6p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT6r ACACT6r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD1f ACOAD1f]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT6m ACACT6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT3 ACACT3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD4f ACOAD4f]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FACOAE160 FACOAE160]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT2 ACACT2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAR140_1 3OAR140_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HAD140_1 3HAD140_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HAD40_1 3HAD40_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1_1 ECOAH1_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH8p ECOAH8p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/FACOAL160p FACOAL160p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1 HACD1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH8 ECOAH8]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH7m ECOAH7m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH6 ECOAH6]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH7 ECOAH7]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH4 ECOAH4]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR100y_1 EAR100y_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT5p ACACT5p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH3 ECOAH3]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT5r ACACT5r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH1 ECOAH1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT5m ACACT5m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD3f ACOAD3f]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD1fm ACOAD1fm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT2m ACACT2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAS80_1 3OAS80_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD6f ACOAD6f]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOA60OR ACOA60OR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OACOAR 3OACOAR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR40y_1 EAR40y_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/C160CPT1 C160CPT1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH3_1 ECOAH3_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACCOACrm ACCOACrm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACCOAhi ACCOAhi]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH5_1 ECOAH5_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR140y_1 EAR140y_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAR3m ACOAR3m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HAD160_1 3HAD160_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT7m ACACT7m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOA80OR ACOA80OR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT7r ACACT7r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT7p ACACT7p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOATAm ACOATAm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/MCOATAm MCOATAm]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOA160OR ACOA160OR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAS100_1 3OAS100_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAR2m ACOAR2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD5f ACOAD5f]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAR40_1 3OAR40_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OACOAS 3OACOAS]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH5 ECOAH5]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH2 ECOAH2]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR40x_1 EAR40x_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOA40OR ACOA40OR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT2r ACACT2r]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAS120_1 3OAS120_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAR100_1 3OAR100_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH4m ECOAH4m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH4p ECOAH4p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR140x_1 EAR140x_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAD7f ACOAD7f]
+
−
** [http://bigg.ucsd.edu/universal/reactions/KAS14_1 KAS14_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/C160CPT2rbc C160CPT2rbc]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT1m ACACT1m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HAD60_1 3HAD60_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACACT1x ACACT1x]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH7p ECOAH7p]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAR120_1 3OAR120_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR80y_1 EAR80y_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/EAR60y_1 EAR60y_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAS160_1 3OAS160_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/COA1819ZD9DS COA1819ZD9DS]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH3m ECOAH3m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3OAR60_1 3OAR60_1]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOA100OR ACOA100OR]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ECOAH2m ECOAH2m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/ACOAR4m ACOAR4m]
+
−
** [http://bigg.ucsd.edu/universal/reactions/3HAD100_1 3HAD100_1]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Fatty acid metabolism}}
+
* EC Number : 2.4.2.10
−
{{#set: reaction found=36}}
+
* BioCyc : META:OROPRIBTRANS-RXN
−
{{#set: reaction not found=146}}
+
* MetaNetX (MNX) Equation : MNXR102231
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10380 10380]
 +
* Reactome : REACT_R-ATH-73567
 +
* KEGG Reaction : R01870
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Orotate phosphoribosyltransferase}}
 +
{{#set: gene associated=EF1712}}
 +
{{#set: in pathway=map01100|map00240|map00983}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:34, 10 January 2018

Reaction ORPT

  • direction:
    • REVERSIBLE
  • common name:
    • Orotate phosphoribosyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Diphosphate[c] + 1.0 Orotidine 5'-phosphate[c] <=> 1.0 Orotate C5H3N2O4[c] + 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.4.2.10
  • BioCyc : META:OROPRIBTRANS-RXN
  • MetaNetX (MNX) Equation : MNXR102231
  • RHEA:
  • Reactome : REACT_R-ATH-73567
  • KEGG Reaction : R01870




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