Difference between revisions of "Bz"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAR ALAR] == * direction: ** REVERSIBLE * common name: ** Alanine racemase * Synonym(s): == React...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_pydam TransportSeed_pydam] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reactio...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAR ALAR] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_pydam TransportSeed_pydam] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
* common name:
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** Alanine racemase
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ala__L]][c] '''<=>''' 1.0 [[ala__D]][c]
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** 1.0 [[pydam]][e] '''=>''' 1.0 [[pydam]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Alanine[c] '''<=>''' 1.0 D-Alanine[c]
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** 1.0 Pyridoxamine[e] '''=>''' 1.0 Pyridoxamine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0849]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* [[manual]]:
** [[pantograph]]:
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** [[added to manage seeds from extracellular to cytosol compartment]]
*** [[e_coli_sstr_k12_substr_mg1655]]
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*** [[l_plantarum_wcfs1]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20249 20249]
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{{#set: in pathway=}}
* BioCyc : META:ALARACECAT-RXN
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{{#set: reconstruction category=manual}}
* MetaNetX (MNX) Equation : MNXR95693
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{{#set: reconstruction source=added to manage seeds from extracellular to cytosol compartment}}
* KEGG Reaction : R00401
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* EC Number : 5.1.1.1
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Alanine racemase}}
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{{#set: gene associated=EF0849}}
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{{#set: in pathway=map00473|map01100}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
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Revision as of 15:34, 10 January 2018

Reaction TransportSeed_pydam

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Pyridoxamine[e] => 1.0 Pyridoxamine[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links