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| Line 1: |
Line 1: |
| − | [[Category:Pathway]] | + | [[Category:Gene]] |
| − | == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030] == | + | == Gene EF0290 == |
| − | * common_name:
| + | |
| − | ** Pentose phosphate pathway
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction(s) found == | + | == Reactions associated == |
| − | '''26''' reactions found over '''69''' reactions in the full pathway
| + | * Reaction: [[CYSTGL]] |
| − | * [[DDGLK]] | + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | ** 3 associated gene(s):
| + | * Reaction: [[CYSTGL_1]] |
| − | *** [[EF0424]]
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | *** [[EF0840]] | + | * Reaction: [[CYSTL]] |
| − | *** [[EF2265]]
| + | ** Source: [[orthology-l_plantarum_wcfs1]] |
| − | ** 3 reconstruction source(s) associated:
| + | * Reaction: [[SHSL1]] |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | ** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]] |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | * Reaction: [[TRPAS1]] |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | ** Source: [[orthology-b_subtilis_subsp_subtilis_str168]] |
| − | * [[DDPGALA]] | + | == Pathways associated == |
| − | ** 2 associated gene(s):
| + | * [[map01100]] |
| − | *** [[EF2266]]
| + | * [[map00450]] |
| − | *** [[EF0423]] | + | * [[map01110]] |
| − | ** 1 reconstruction source(s) associated:
| + | * [[map00920]] |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | * [[map00270]] |
| − | * [[DKGLCNR2y]]
| + | * [[map01230]] |
| − | ** 1 associated gene(s):
| + | * [[map01130]] |
| − | *** [[EF3141]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | * [[DRBK]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF2961]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]] | + | |
| − | * [[DRPA]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF0174]]
| + | |
| − | ** 3 reconstruction source(s) associated: | + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[EDA]] | + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[EF2266]]
| + | |
| − | *** [[EF0423]] | + | |
| − | *** [[EF3134]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]] | + | |
| − | * [[FBA]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1167]]
| + | |
| − | ** 3 reconstruction source(s) associated: | + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[FBA2]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1167]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[FBP]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1503]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[G6PDH2r]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1004]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[G6PI]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1416]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[GLYCK2]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF2646]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | * [[GND]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[EF3142]]
| + | |
| − | *** [[EF1049]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[GNK]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF3235]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[PFK]]
| + | |
| − | ** 4 associated gene(s):
| + | |
| − | *** [[EF1045]]
| + | |
| − | *** [[EF1806]]
| + | |
| − | *** [[EF0718]]
| + | |
| − | *** [[EF0693]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[PFK_3]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1045]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | * [[PGI]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1416]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[PGL]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF1918]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[PPM2]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF0185]]
| + | |
| − | ** 2 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[PRPPS]]
| + | |
| − | ** 2 associated gene(s):
| + | |
| − | *** [[EF3163]]
| + | |
| − | *** [[EF2073]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[RBK]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF2961]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[RPE]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF3118]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[RPI]]
| + | |
| − | ** 3 associated gene(s):
| + | |
| − | *** [[EF0197]]
| + | |
| − | *** [[EF1835]]
| + | |
| − | *** [[EF1834]]
| + | |
| − | ** 3 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-e_coli_sstr_k12_substr_mg1655]]
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | *** [[orthology-l_plantarum_wcfs1]]
| + | |
| − | * [[TALA]]
| + | |
| − | ** 1 associated gene(s):
| + | |
| − | *** [[EF3304]]
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[orthology-b_subtilis_subsp_subtilis_str168]]
| + | |
| − | * [[TKT1]]
| + | |
| − | ** 0 associated gene:
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
| + | |
| − | * [[TKT2]]
| + | |
| − | ** 0 associated gene:
| + | |
| − | ** 1 reconstruction source(s) associated:
| + | |
| − | *** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
| + | |
| − | == Reaction(s) not found == | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/2DGLCNRy 2DGLCNRy] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/2DHGLCK 2DHGLCK]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/BFBP BFBP]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/BFBPh BFBPh] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/DASCBH DASCBH]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/EDD EDD]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBA3 FBA3] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBA3hi FBA3hi]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/FPGPL FPGPL]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PADH G6PADH] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PADHh G6PADHh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PBDH G6PBDH]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PBDHh G6PBDHh] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PDH1 G6PDH1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PDH1er G6PDH1er]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PDH2er G6PDH2er] | + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PI2 G6PI2]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PI3 G6PI3]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PI_1 G6PI_1]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/G6PIh G6PIh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/GADktpp GADktpp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/GNDer GNDer]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/GNKh GNKh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PFK_adp PFK_adp]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PFK_ppi PFK_ppi]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGDHh PGDHh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGIA PGIA]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGIAh PGIAh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGIBh PGIBh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGLCNDH PGLCNDH]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGLer PGLer]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/PGLh PGLh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/R15BPK R15BPK]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RPDPK RPDPK]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RPEh RPEh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/RPIh RPIh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TAh TAh]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TKT1h TKT1h]
| + | |
| − | * [http://bigg.ucsd.edu/universal/reactions/TKT2h TKT2h]
| + | |
| | == External links == | | == External links == |
| − | {{#set: common_name=Pentose phosphate pathway}}
| + | {{#set: reaction associated=CYSTGL|CYSTGL_1|CYSTL|SHSL1|TRPAS1}} |
| − | {{#set: reaction found=26}} | + | {{#set: pathway associated=map01100|map00450|map01110|map00920|map00270|map01230|map01130}} |
| − | {{#set: total reaction=69}} | + | |
| − | {{#set: completion rate=38.0}}
| + | |
