Difference between revisions of "PPM"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HETZK HETZK] == * direction: ** LEFT-TO-RIGHT * common name: ** Hydroxyethylthiazole kinase * Synon...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPM PPM] == * direction: ** REVERSIBLE * common name: ** Phosphopentomutase * Synonym(s): == React...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/HETZK HETZK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPM PPM] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Hydroxyethylthiazole kinase
+
** Phosphopentomutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[4mhetz]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[4mpetz]][c]
+
** 1.0 [[r1p]][c] '''<=>''' 1.0 [[r5p]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 4-Methyl-5-(2-hydroxyethyl)-thiazole[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 4-Methyl-5-(2-phosphoethyl)-thiazole[c]
+
** 1.0 Alpha-D-Ribose 1-phosphate[c] '''<=>''' 1.0 Alpha-D-Ribose 5-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2777]]
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* Gene: [[EF0185]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
 
** '''11''' reactions found over '''24''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** Tool: [[pantograph]]
 
** Source: [[orthology-l_plantarum_wcfs1]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR103115
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24212 24212]
+
* EC Number : 5.4.2
* BioCyc : META:THIAZOLSYN3-RXN
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* BioCyc : META:RXN-14456
* MetaNetX (MNX) Equation : MNXR100611
+
{{#set: direction=REVERSIBLE}}
* KEGG Reaction : R04448
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{{#set: common name=Phosphopentomutase}}
* EC Number : 2.7.1.50
+
{{#set: gene associated=EF0185}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: in pathway=}}
{{#set: common name=Hydroxyethylthiazole kinase}}
+
{{#set: gene associated=EF2777}}
+
{{#set: in pathway=map01100|map00730}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:25, 21 March 2018

Reaction PPM

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphopentomutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Alpha-D-Ribose 1-phosphate[c] <=> 1.0 Alpha-D-Ribose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103115
  • EC Number : 5.4.2
  • BioCyc : META:RXN-14456