Difference between revisions of "XYLK"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CLPNS140 CLPNS140] == * direction: ** REVERSIBLE * common name: ** Cardiolipin synthase (n-C14:0) *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLK XYLK] == * direction: ** LEFT-TO-RIGHT * common name: ** Xylulokinase * Synonym(s): == Reacti...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CLPNS140 CLPNS140] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/XYLK XYLK] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Cardiolipin synthase (n-C14:0)
+
** Xylulokinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 2.0 [[pg140]][c] '''<=>''' 1.0 [[glyc]][c] '''+''' 1.0 [[clpn140]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[xylu__D]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[xu5p__D]][c]
 
* With common name(s):
 
* With common name(s):
** 2.0 Phosphatidylglycerol (ditetradecanoyl, n-C14:0)[c] '''<=>''' 1.0 Glycerol[c] '''+''' 1.0 Cardiolipin (tetratetradecanoyl, n-C14:0)[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 D-Xylulose[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 D-Xylulose 5-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1608]]
+
* Gene: [[EF0557]]
** 2_reaction_to_add_delete
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
* [[EF0631]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
** 2_reaction_to_add_delete
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
 +
** '''15''' reactions found over '''54''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[manual]]
+
* Category: [[orthology]]
** Source: [[manual-2_reaction_to_add_delete]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR96782
+
* EC Number : 2.7.1.17
{{#set: direction=REVERSIBLE}}
+
* BioCyc : META:XYLULOKIN-RXN
{{#set: common name=Cardiolipin synthase (n-C14:0)}}
+
* MetaNetX (MNX) Equation : MNXR105255
{{#set: gene associated=EF1608|EF0631}}
+
* RHEA:
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10964 10964]
{{#set: reconstruction category=manual}}
+
* Reactome : REACT_R-ATH-5662466
{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
+
* KEGG Reaction : R01639
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Xylulokinase}}
 +
{{#set: gene associated=EF0557}}
 +
{{#set: in pathway=map01100|map00040}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:26, 21 March 2018

Reaction XYLK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Xylulokinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 D-Xylulose[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 D-Xylulose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.17
  • BioCyc : META:XYLULOKIN-RXN
  • MetaNetX (MNX) Equation : MNXR105255
  • RHEA:
  • Reactome : REACT_R-ATH-5662466
  • KEGG Reaction : R01639