Difference between revisions of "OXGDC"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ZN2abcpppe ZN2abcpppe] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OXGDC OXGDC] == * direction: ** LEFT-TO-RIGHT * common name: ** 2 oxoglutarate decarboxylase * Syno...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ZN2abcpppe ZN2abcpppe] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OXGDC OXGDC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** 2 oxoglutarate decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[zn2]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[zn2]][e] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[akg]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[sucsal]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 Zinc[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Zinc[e] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Succinic semialdehyde[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1400]]
+
* Gene: [[EF0448]]
** 1_new_rxn_for_biomass
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[manual]]
+
* Category: [[orthology]]
** Source: [[manual-1_new_rxn_for_biomass]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10524 10524]
 +
* BioCyc : META:RXN-7774
 +
* MetaNetX (MNX) Equation : MNXR102243
 +
* KEGG Reaction : R00272
 +
* EC Number : 4.1.1.71
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=EF1400}}
+
{{#set: common name=2 oxoglutarate decarboxylase}}
 +
{{#set: gene associated=EF0448}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:26, 21 March 2018

Reaction OXGDC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2 oxoglutarate decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxoglutarate[c] + 1.0 H+[c] => 1.0 Succinic semialdehyde[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN-7774
  • MetaNetX (MNX) Equation : MNXR102243
  • KEGG Reaction : R00272
  • EC Number : 4.1.1.71