Difference between revisions of "TransportSeed orot"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI1 XYLI1] == * direction: ** REVERSIBLE * common name: ** Xylose isomerase * Synonym(s): == Rea...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_orot TransportSeed_orot] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI1 XYLI1] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_orot TransportSeed_orot] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
* common name:
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** Xylose isomerase
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[xyl__D]][c] '''<=>''' 1.0 [[xylu__D]][c]
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** 1.0 [[orot]][e] '''=>''' 1.0 [[orot]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 D-Xylose[c] '''<=>''' 1.0 D-Xylulose[c]
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** 1.0 Orotate C5H3N2O4[e] '''=>''' 1.0 Orotate C5H3N2O4[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0556]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
 
** '''15''' reactions found over '''54''' reactions in the full pathway
 
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
 
** '''22''' reactions found over '''63''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[manual]]
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** Source: [[manual-import_from_medium]]
*** Tool: [[pantograph]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22816 22816]
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{{#set: in pathway=}}
* BioCyc : META:XYLISOM-RXN
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{{#set: reconstruction category=manual}}
* MetaNetX (MNX) Equation : MNXR105253
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{{#set: reconstruction source=manual-import_from_medium}}
* KEGG Reaction : R01432
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
* EC Number : 5.3.1.5
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Xylose isomerase}}
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{{#set: gene associated=EF0556}}
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{{#set: in pathway=map01100|map00040|map00051}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 15:27, 21 March 2018

Reaction TransportSeed_orot

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Orotate C5H3N2O4[e] => 1.0 Orotate C5H3N2O4[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links