Difference between revisions of "RHCCE"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NI2t3pppe NI2t3pppe] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RHCCE RHCCE] == * direction: ** LEFT-TO-RIGHT * common name: ** S-ribosylhomocysteine cleavage enzy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/NI2t3pppe NI2t3pppe] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RHCCE RHCCE] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** S-ribosylhomocysteine cleavage enzyme
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][e] '''+''' 1.0 [[ni2]][c] '''=>''' 1.0 [[ni2]][e] '''+''' 1.0 [[h]][c]
+
** 1.0 [[rhcys]][c] '''=>''' 1.0 [[dhptd]][c] '''+''' 1.0 [[hcys__L]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[e] '''+''' 1.0 Nickel[c] '''=>''' 1.0 Nickel[e] '''+''' 1.0 H+[c]
+
** 1.0 S-Ribosyl-L-homocysteine[c] '''=>''' 1.0 4,5-dihydroxy-2,3-pentanedione[c] '''+''' 1.0 L-Homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0859]]
+
* Gene: [[EF1182]]
** 1_new_rxn_for_biomass
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''25''' reactions found over '''135''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[manual]]
+
* Category: [[orthology]]
** Source: [[manual-1_new_rxn_for_biomass]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17753 17753]
 +
* BioCyc : META:RIBOSYLHOMOCYSTEINASE-RXN
 +
* MetaNetX (MNX) Equation : MNXR104026
 +
* KEGG Reaction : R01291
 +
* EC Number : 4.4.1.21
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=EF0859}}
+
{{#set: common name=S-ribosylhomocysteine cleavage enzyme}}
{{#set: in pathway=}}
+
{{#set: gene associated=EF1182}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00270|map01230}}
{{#set: reconstruction source=manual-1_new_rxn_for_biomass}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:28, 21 March 2018

Reaction RHCCE

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • S-ribosylhomocysteine cleavage enzyme
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 S-Ribosyl-L-homocysteine[c] => 1.0 4,5-dihydroxy-2,3-pentanedione[c] + 1.0 L-Homocysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RIBOSYLHOMOCYSTEINASE-RXN
  • MetaNetX (MNX) Equation : MNXR104026
  • KEGG Reaction : R01291
  • EC Number : 4.4.1.21