Difference between revisions of "RNTR1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DCYTD DCYTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxycytidine deaminase * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNTR1 RNTR1] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside triphosphate reducta...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/DCYTD DCYTD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RNTR1 RNTR1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Deoxycytidine deaminase
+
** Ribonucleoside triphosphate reductase  ATP
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[dcyt]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[duri]][c]
+
** 1.0 [[trdrd]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[trdox]][c] '''+''' 1.0 [[datp]][c] '''+''' 1.0 [[h2o]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Deoxycytidine[c] '''+''' 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Deoxyuridine[c]
+
** 1.0 Reduced thioredoxin[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Oxidized thioredoxin[c] '''+''' 1.0 DATP C10H12N5O12P3[c] '''+''' 1.0 H2O H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0175]]
+
* Gene: [[EF2754]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 +
* Gene: [[EF1491]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''82''' reactions found over '''244''' reactions in the full pathway
 
** '''82''' reactions found over '''244''' reactions in the full pathway
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''22''' reactions found over '''72''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* EC Number : 3.5.4.5
+
* MetaNetX (MNX) Equation : MNXR104070
* BioCyc : META:CYTIDEAM-RXN
+
* KEGG Reaction : R02014
* MetaNetX (MNX) Equation : MNXR97207
+
* EC Number : 1.17.4.2
* RHEA:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13433 13433]
+
* Reactome : REACT_R-BTA-73608
+
* KEGG Reaction : R02485
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Deoxycytidine deaminase}}
+
{{#set: common name=Ribonucleoside triphosphate reductase  ATP }}
{{#set: gene associated=EF0175}}
+
{{#set: gene associated=EF2754|EF1491}}
{{#set: in pathway=map01100|map00240|map00983}}
+
{{#set: in pathway=map00240|map01100|map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:28, 21 March 2018

Reaction RNTR1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ribonucleoside triphosphate reductase ATP
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Reduced thioredoxin[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 Oxidized thioredoxin[c] + 1.0 DATP C10H12N5O12P3[c] + 1.0 H2O H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104070
  • KEGG Reaction : R02014
  • EC Number : 1.17.4.2