Difference between revisions of "GAMpts"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPNDH PPNDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Prephenate dehydratase * Synonym(s)...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GAMpts GAMpts] == * direction: ** LEFT-TO-RIGHT * common name: ** D-glucosamine transport via PEP:P...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPNDH PPNDH] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GAMpts GAMpts] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Prephenate dehydratase
+
** D-glucosamine transport via PEP:Pyr PTS
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[pphn]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[phpyr]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[gam]][e] '''+''' 1.0 [[pep]][c] '''=>''' 1.0 [[pyr]][c] '''+''' 1.0 [[gam6p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Prephenate[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Phenylpyruvate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 D-Glucosamine[e] '''+''' 1.0 Phosphoenolpyruvate[c] '''=>''' 1.0 Pyruvate[c] '''+''' 1.0 D-Glucosamine 6-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1568]]
+
* Gene: [[EF1516]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
* Gene: [[EF0709]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
* Gene: [[EF0710]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 
−
** '''13''' reactions found over '''59''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''56''' reactions found over '''228''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:PREPHENATEDEHYDRAT-RXN
+
* MetaNetX (MNX) Equation : MNXR100034
−
* MetaNetX (MNX) Equation : MNXR103123
+
−
* KEGG Reaction : R01373
+
−
* EC Number : 4.2.1.51
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Prephenate dehydratase}}
+
{{#set: common name=D-glucosamine transport via PEP:Pyr PTS}}
−
{{#set: gene associated=EF1568}}
+
{{#set: gene associated=EF1516|EF0709|EF0710}}
−
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:28, 21 March 2018

Reaction GAMpts

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • D-glucosamine transport via PEP:Pyr PTS
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glucosamine[e] + 1.0 Phosphoenolpyruvate[c] => 1.0 Pyruvate[c] + 1.0 D-Glucosamine 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100034




Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=GAMpts&oldid=10359"