Difference between revisions of "CYTBD"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CRNabc CRNabc] == * direction: ** LEFT-TO-RIGHT * common name: ** L-carnitine transport via ABC sys...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTBD CYTBD] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytochrome oxidase bd (ubiquinol-8:...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CRNabc CRNabc] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTBD CYTBD] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** L-carnitine transport via ABC system
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** Cytochrome oxidase bd (ubiquinol-8: 2 protons)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[crn]][e] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[crn]][c] '''+''' 1.0 [[adp]][c]
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** 0.5 [[o2]][c] '''+''' 1.0 [[q8h2]][c] '''+''' 2.0 [[h]][c] '''=>''' 1.0 [[q8]][c] '''+''' 1.0 [[h2o]][c] '''+''' 2.0 [[h]][e]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Carnitine[e] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 L-Carnitine[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
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** 0.5 O2 O2[c] '''+''' 1.0 Ubiquinol-8[c] '''+''' 2.0 H+[c] '''=>''' 1.0 Ubiquinone-8[c] '''+''' 1.0 H2O H2O[c] '''+''' 2.0 H+[e]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0865]]
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* Gene: [[EF2061]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** Source: [[manual-2_reaction_to_add_delete]]
* [[EF0862]]
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* Gene: [[EF2060]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** Source: [[manual-2_reaction_to_add_delete]]
* [[EF0863]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[EF0864]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[manual]]
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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** Source: [[manual-2_reaction_to_add_delete]]
*** Tool: [[pantograph]]
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*** Comment: [[this was a reaction occurring in the perisplasm of e. coli]]
 
== External links  ==
 
== External links  ==
* RHEA:
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* MetaNetX (MNX) Equation : MNXR97031
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=38719#1 38719#1]
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* MetaNetX (MNX) Equation : MNXR96905
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{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=L-carnitine transport via ABC system}}
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{{#set: common name=Cytochrome oxidase bd (ubiquinol-8: 2 protons)}}
{{#set: gene associated=EF0865|EF0862|EF0863|EF0864}}
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{{#set: gene associated=EF2061|EF2060}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=manual-2_reaction_to_add_delete}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=this was a reaction occurring in the perisplasm of e. coli}}

Latest revision as of 15:29, 21 March 2018

Reaction CYTBD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytochrome oxidase bd (ubiquinol-8: 2 protons)
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 0.5 o2[c] + 1.0 q8h2[c] + 2.0 h[c] => 1.0 q8[c] + 1.0 h2o[c] + 2.0 h[e]
  • With common name(s):
    • 0.5 O2 O2[c] + 1.0 Ubiquinol-8[c] + 2.0 H+[c] => 1.0 Ubiquinone-8[c] + 1.0 H2O H2O[c] + 2.0 H+[e]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR97031