Difference between revisions of "PAPPT3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PFL PFL] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyruvate formate lyase * Synonym(s): =...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PAPPT3 PAPPT3] == * direction: ** LEFT-TO-RIGHT * common name: ** Phospho-N-acetylmuramoyl-pentapep...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PFL PFL] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PAPPT3 PAPPT3] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Pyruvate formate lyase
+
** Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[coa]][c] '''+''' 1.0 [[pyr]][c] '''=>''' 1.0 [[accoa]][c] '''+''' 1.0 [[for]][c]
+
** 1.0 [[ugmda]][c] '''+''' 1.0 [[udcpp]][c] '''=>''' 1.0 [[uagmda]][c] '''+''' 1.0 [[ump]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Coenzyme A[c] '''+''' 1.0 Pyruvate[c] '''=>''' 1.0 Acetyl-CoA[c] '''+''' 1.0 Formate[c]
+
** 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1.0 Undecaprenyl phosphate[c] '''=>''' 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1.0 UMP C9H11N2O9P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1612]]
+
* Gene: [[EF0992]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
−
* [[EF1613]]
+
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00640]]: [http://www.genome.jp/dbget-bin/www_bget?map00640 map00640]
+
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
−
** '''15''' reactions found over '''143''' reactions in the full pathway
+
** '''10''' reactions found over '''27''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''104''' reactions found over '''715''' reactions in the full pathway
+
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
+
−
** '''31''' reactions found over '''163''' reactions in the full pathway
+
−
* [[map00650]]: [http://www.genome.jp/dbget-bin/www_bget?map00650 map00650]
+
−
** '''14''' reactions found over '''156''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-l_plantarum_wcfs1]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR102373
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11844 11844]
+
* EC Number : 2.7.8.13
−
* BioCyc : META:PYRUVFORMLY-RXN
+
−
* MetaNetX (MNX) Equation : MNXR102514
+
−
* KEGG Reaction : R00212
+
−
* EC Number : 2.3.1.54
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Pyruvate formate lyase}}
+
{{#set: common name=Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)}}
−
{{#set: gene associated=EF1612|EF1613}}
+
{{#set: gene associated=EF0992}}
−
{{#set: in pathway=map01100|map00640|map01120|map00620|map00650}}
+
{{#set: in pathway=map01100|map00550}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:30, 21 March 2018

Reaction PAPPT3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1.0 Undecaprenyl phosphate[c] => 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1.0 UMP C9H11N2O9P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR102373
  • EC Number : 2.7.8.13




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