Difference between revisions of "TransportSeed thymd"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP5 PUNP5] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Inosi...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_thymd TransportSeed_thymd] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reactio...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP5 PUNP5] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_thymd TransportSeed_thymd] ==
 
* direction:
 
* direction:
** REVERSIBLE
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** LEFT-TO-RIGHT
* common name:
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** Purine-nucleoside phosphorylase (Inosine)
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ins]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[r1p]][c] '''+''' 1.0 [[hxan]][c]
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** 1.0 [[thymd]][e] '''=>''' 1.0 [[thymd]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Inosine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 Alpha-D-Ribose 1-phosphate[c] '''+''' 1.0 Hypoxanthine[c]
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** 1.0 Thymidine C10H14N2O5[e] '''=>''' 1.0 Thymidine C10H14N2O5[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[EF0186]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
* [[EF0187]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''97''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[orthology]]
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* Category: [[manual]]
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
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** Source: [[manual-import_from_medium]]
*** Tool: [[pantograph]]
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*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-l_plantarum_wcfs1]]
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*** Tool: [[pantograph]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27646 27646]
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{{#set: in pathway=}}
* BioCyc : META:INOPHOSPHOR-RXN
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{{#set: reconstruction category=manual}}
* MetaNetX (MNX) Equation : MNXR103347
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{{#set: reconstruction source=manual-import_from_medium}}
* KEGG Reaction : R01863
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{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
* EC Number : 2.4.2.1
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Purine-nucleoside phosphorylase (Inosine)}}
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{{#set: gene associated=EF0186|EF0187}}
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{{#set: in pathway=map01100|map00230}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 15:31, 21 March 2018

Reaction TransportSeed_thymd

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Thymidine C10H14N2O5[e] => 1.0 Thymidine C10H14N2O5[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links