Difference between revisions of "GDPMNP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIK2 URIK2] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine kinase (GTP:Uridine) * Syno...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GDPMNP GDPMNP] == * direction: ** LEFT-TO-RIGHT * common name: ** GDP-mannose phyrophosphatase * Sy...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/URIK2 URIK2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GDPMNP GDPMNP] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Uridine kinase (GTP:Uridine)
+
** GDP-mannose phyrophosphatase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[uri]][c] '''+''' 1.0 [[gtp]][c] '''=>''' 1.0 [[ump]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[gdp]][c]
+
** 1.0 [[gdpmann]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 2.0 [[h]][c] '''+''' 1.0 [[gmp]][c] '''+''' 1.0 [[man1p]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Uridine[c] '''+''' 1.0 GTP C10H12N5O14P3[c] '''=>''' 1.0 UMP C9H11N2O9P[c] '''+''' 1.0 H+[c] '''+''' 1.0 GDP C10H12N5O11P2[c]
+
** 1.0 GDP-D-mannose[c] '''+''' 1.0 H2O H2O[c] '''=>''' 2.0 H+[c] '''+''' 1.0 GMP C10H12N5O8P[c] '''+''' 1.0 D-Mannose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0825]]
+
* Gene: [[EF2696]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
* [[map00500]]: [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500]
−
** '''82''' reactions found over '''244''' reactions in the full pathway
+
** '''15''' reactions found over '''81''' reactions in the full pathway
−
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''22''' reactions found over '''72''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
 +
** '''22''' reactions found over '''63''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-l_plantarum_wcfs1]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27650 27650]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27978 27978]
−
* BioCyc : META:URKI-RXN
+
* BioCyc : META:RXN0-5108
−
* MetaNetX (MNX) Equation : MNXR105163
+
* MetaNetX (MNX) Equation : MNXR100092
−
* KEGG Reaction : R00968
+
* KEGG Reaction : R00881
−
* EC Number : 2.7.1.48
+
* EC Number : 3.6.1.-
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Uridine kinase (GTP:Uridine)}}
+
{{#set: common name=GDP-mannose phyrophosphatase}}
−
{{#set: gene associated=EF0825}}
+
{{#set: gene associated=EF2696}}
−
{{#set: in pathway=map01100|map00240|map00983}}
+
{{#set: in pathway=map01100|map00500|map01110|map00051|map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:32, 21 March 2018

Reaction GDPMNP

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GDP-mannose phyrophosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 GDP-D-mannose[c] + 1.0 H2O H2O[c] => 2.0 H+[c] + 1.0 GMP C10H12N5O8P[c] + 1.0 D-Mannose 1-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-5108
  • MetaNetX (MNX) Equation : MNXR100092
  • KEGG Reaction : R00881
  • EC Number : 3.6.1.-




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