Difference between revisions of "TRPTA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate oxidase * Synonym(s):...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTA TRPTA] == * direction: ** REVERSIBLE * common name: ** Tryptophan transaminase * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCTO1 GLYCTO1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTA TRPTA] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Glycolate oxidase
+
** Tryptophan transaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[glyclt]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[glx]][c] '''+''' 1.0 [[h2o2]][c]
+
** 1.0 [[akg]][c] '''+''' 1.0 [[trp__L]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[indpyr]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Glycolate C2H3O3[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 Glyoxylate[c] '''+''' 1.0 Hydrogen peroxide[c]
+
** 1.0 2-Oxoglutarate[c] '''+''' 1.0 L-Tryptophan[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Indolepyruvate C11H8NO3[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF1706]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
 
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
+
* [[map00380]]: [http://www.genome.jp/dbget-bin/www_bget?map00380 map00380]
−
** '''21''' reactions found over '''129''' reactions in the full pathway
+
** '''7''' reactions found over '''163''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''104''' reactions found over '''715''' reactions in the full pathway
+
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
−
** '''45''' reactions found over '''220''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''135''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[gap-filling]]
+
* Category: [[orthology]]
−
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
−
*** Tool: [[meneco]]
+
*** Tool: [[pantograph]]
−
**** Comment: [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.1.3.15
 
−
* BioCyc : META:RXN-969
 
−
* MetaNetX (MNX) Equation : MNXR100338
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25311 25311]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14093 14093]
−
* Reactome : REACT_R-ATH-389842
+
* BioCyc : META:TRYPTOPHAN-AMINOTRANSFERASE-RXN
−
* KEGG Reaction : R00475
+
* MetaNetX (MNX) Equation : MNXR104947
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* KEGG Reaction : R00684
−
{{#set: common name=Glycolate oxidase}}
+
* EC Number : 2.6.1.27
−
{{#set: in pathway=map01100|map00630|map01110|map01120|map01200|map01130}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: common name=Tryptophan transaminase}}
−
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: gene associated=EF1706}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: in pathway=map01100|map00380}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:35, 21 March 2018

Reaction TRPTA

  • direction:
    • REVERSIBLE
  • common name:
    • Tryptophan transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 2-Oxoglutarate[c] + 1.0 L-Tryptophan[c] <=> 1.0 L-Glutamate[c] + 1.0 Indolepyruvate C11H8NO3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:TRYPTOPHAN-AMINOTRANSFERASE-RXN
  • MetaNetX (MNX) Equation : MNXR104947
  • KEGG Reaction : R00684
  • EC Number : 2.6.1.27




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