Difference between revisions of "HSDy"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_so4 TransportSeed_so4] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Fo...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HSDy HSDy] == * direction: ** REVERSIBLE * common name: ** Homoserine dehydrogenase (NADPH) * Synon...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/TransportSeed_so4 TransportSeed_so4] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/HSDy HSDy] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Homoserine dehydrogenase (NADPH)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[so4]][e] '''=>''' 1.0 [[so4]][c]
+
** 1.0 [[hom__L]][c] '''+''' 1.0 [[nadp]][c] '''<=>''' 1.0 [[nadph]][c] '''+''' 1.0 [[aspsa]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Sulfate[e] '''=>''' 1.0 Sulfate[c]
+
** 1.0 L-Homoserine[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 L-Aspartate 4-semialdehyde[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[EF0368]]
 +
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
 +
* Gene: [[EF2422]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''179''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
 +
** '''13''' reactions found over '''34''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''25''' reactions found over '''135''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''56''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''23''' reactions found over '''133''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''135''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[manual]]
+
* Category: [[orthology]]
−
** Source: [[manual-import_from_medium]]
+
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
−
*** Comment: [[added to manage seeds from extracellular to cytosol compartment]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-l_plantarum_wcfs1]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15761 15761]
−
{{#set: reconstruction category=manual}}
+
* MetaNetX (MNX) Equation : MNXR100734
−
{{#set: reconstruction source=manual-import_from_medium}}
+
* KEGG Reaction : R01775
−
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
+
* EC Number : 1.1.1.3
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Homoserine dehydrogenase (NADPH)}}
 +
{{#set: gene associated=EF0368|EF2422}}
 +
{{#set: in pathway=map01100|map01110|map00300|map01120|map00270|map01230|map00260|map01130}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:36, 21 March 2018

Reaction HSDy

  • direction:
    • REVERSIBLE
  • common name:
    • Homoserine dehydrogenase (NADPH)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Homoserine[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c] <=> 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 L-Aspartate 4-semialdehyde[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100734
  • KEGG Reaction : R01775
  • EC Number : 1.1.1.3




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