Difference between revisions of "PPA"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGGT4 PGGT4] == * direction: ** LEFT-TO-RIGHT * common name: ** peptidoglycan glycosyltransferase *...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PPA PPA] == * direction: ** LEFT-TO-RIGHT * common name: ** Inorganic diphosphatase * Synonym(s):...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGGT4 PGGT4] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PPA PPA] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** peptidoglycan glycosyltransferase
+
** Inorganic diphosphatase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[uaagmdalac]][c] '''=>''' 1.0 [[udcpdp]][c] '''+''' 1.0 [[PGlac2]][c]
+
** 1.0 [[ppi]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 2.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Undecaprenyl_diphospho_N_acetylmuramoyl__N_acetylglucosamine__L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_lactate[c] '''=>''' 1.0 Undecaprenyl diphosphate[c] '''+''' 1.0 peptidoglycan_with_D_lac_as_C_terminal_residue_to_form_pentadepsipeptide[c]
+
** 1.0 Diphosphate[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 2.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1148]]
+
* Gene: [[EF1611]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** Source: [[orthology-l_plantarum_wcfs1]]
* [[EF2857]]
+
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* [[EF0991]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
* [[EF0680]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00190]]: [http://www.genome.jp/dbget-bin/www_bget?map00190 map00190]
 +
** '''1''' reactions found over '''35''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-l_plantarum_wcfs1]]
 
** Source: [[orthology-l_plantarum_wcfs1]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
* Category: [[manual]]
 
** Source: [[manual-curation_from_orthology]]
 
 
== External links  ==
 
== External links  ==
 +
* EC Number : 3.6.1.1
 +
* BioCyc : META:INORGPYROPHOSPHAT-RXN
 +
* MetaNetX (MNX) Equation : MNXR100808
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24576 24576]
 +
* Reactome : REACT_R-ATH-449937
 +
* KEGG Reaction : R00004
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=peptidoglycan glycosyltransferase}}
+
{{#set: common name=Inorganic diphosphatase}}
{{#set: gene associated=EF1148|EF2857|EF0991|EF0680}}
+
{{#set: gene associated=EF1611}}
{{#set: in pathway=}}
+
{{#set: in pathway=map00190}}
{{#set: reconstruction category=orthology|manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=manual-curation_from_orthology|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction source=orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:39, 21 March 2018

Reaction PPA

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Inorganic diphosphatase
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 ppi[c] + 1.0 h2o[c] => 1.0 h[c] + 2.0 pi[c]
  • With common name(s):
    • 1.0 Diphosphate[c] + 1.0 H2O H2O[c] => 1.0 H+[c] + 2.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 3.6.1.1
  • BioCyc : META:INORGPYROPHOSPHAT-RXN
  • MetaNetX (MNX) Equation : MNXR100808
  • RHEA:
  • Reactome : REACT_R-ATH-449937
  • KEGG Reaction : R00004