Difference between revisions of "PTRCOX1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CAT CAT] == * direction: ** LEFT-TO-RIGHT * common name: ** Catalase * Synonym(s): == Reaction For...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCOX1 PTRCOX1] == * direction: ** LEFT-TO-RIGHT * common name: ** Putrescine:oxygen oxidoreductas...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CAT CAT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCOX1 PTRCOX1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Catalase
+
** Putrescine:oxygen oxidoreductase (deaminating)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2.0 [[h2o2]][c] '''=>''' 2.0 [[h2o]][c] '''+''' 1.0 [[o2]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[ptrc]][c] '''+''' 1.0 [[o2]][c] '''=>''' 1.0 [[4abutn]][c] '''+''' 1.0 [[nh4]][c] '''+''' 1.0 [[h2o2]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2.0 Hydrogen peroxide[c] '''=>''' 2.0 H2O H2O[c] '''+''' 1.0 O2 O2[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 Putrescine[c] '''+''' 1.0 O2 O2[c] '''=>''' 1.0 4-Aminobutanal[c] '''+''' 1.0 Ammonium[c] '''+''' 1.0 Hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[EF1597]]
 
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''179''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''135''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''45''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map00380]]: [http://www.genome.jp/dbget-bin/www_bget?map00380 map00380]
 
−
** '''7''' reactions found over '''163''' reactions in the full pathway
 
−
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 
−
** '''21''' reactions found over '''129''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[gap-filling]]
−
** Source: [[orthology-e_coli_sstr_k12_substr_mg1655]]
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[meneco]]
−
** Source: [[orthology-b_subtilis_subsp_subtilis_str168]]
+
**** Comment: [[added for gapfilling]]
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-l_plantarum_wcfs1]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* EC Number : 1.11.1.21
 
−
* BioCyc : META:CATAL-RXN
 
−
* MetaNetX (MNX) Equation : MNXR96455
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20309 20309]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18273 18273]
−
* Reactome : REACT_R-ATH-76031
+
* EC Number : 1.4.3.10
−
* KEGG Reaction : R00009
+
* MetaNetX (MNX) Equation : MNXR103334
 +
* KEGG Reaction : R01151
 +
* BioCyc : META:PUTRESCINE-OXIDASE-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Catalase}}
+
{{#set: common name=Putrescine:oxygen oxidoreductase (deaminating)}}
−
{{#set: gene associated=EF1597}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=map01110|map01130|map01200|map00380|map00630}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=orthology-e_coli_sstr_k12_substr_mg1655|orthology-b_subtilis_subsp_subtilis_str168|orthology-l_plantarum_wcfs1}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:45, 21 March 2018

Reaction PTRCOX1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Putrescine:oxygen oxidoreductase (deaminating)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 Putrescine[c] + 1.0 O2 O2[c] => 1.0 4-Aminobutanal[c] + 1.0 Ammonium[c] + 1.0 Hydrogen peroxide[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.4.3.10
  • MetaNetX (MNX) Equation : MNXR103334
  • KEGG Reaction : R01151
  • BioCyc : META:PUTRESCINE-OXIDASE-RXN




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