Difference between revisions of "Gap-filling"

Revision as of 23:14, 9 January 2018

Reaction RNDR3

• direction:
  • LEFT-TO-RIGHT
• common name:
  • Ribonucleoside-diphosphate reductase (CDP)
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1.0 trdrd[c] + 1.0 cdp[c] => 1.0 dcdp[c] + 1.0 trdox[c] + 1.0 h2o[c]
• With common name(s):
  • 1.0 Reduced thioredoxin[c] + 1.0 CDP C9H12N3O11P2[c] => 1.0 DCDP C9H12N3O10P2[c] + 1.0 Oxidized thioredoxin[c] + 1.0 H2O H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• EF0472
  • pantograph-b_subtilis_subsp_subtilis_str168
• EF0470
  • pantograph-l_plantarum_wcfs1
  • pantograph-b_subtilis_subsp_subtilis_str168
• EF0471
  • pantograph-l_plantarum_wcfs1
  • pantograph-b_subtilis_subsp_subtilis_str168

Pathways

• map00240: map00240
  • 83 reactions found over 244 reactions in the full pathway
• map01100: map01100
  • 508 reactions found over 2349 reactions in the full pathway
• map00480: map00480
  • 11 reactions found over 39 reactions in the full pathway
• map00230: map00230
  • 98 reactions found over 298 reactions in the full pathway

Reconstruction information

• orthology:
  • pantograph:
    • l_plantarum_wcfs1
    • b_subtilis_subsp_subtilis_str168

External links

• BioCyc : META:CDPREDUCT-RXN
• MetaNetX (MNX) Equation : MNXR104064
• KEGG Reaction : R02024
• EC Number : 1.17.4.1