Difference between revisions of "LalaLglu"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MOADCST MOADCST] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With iden...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAR ALAR] == * direction: ** REVERSIBLE * common name: ** Alanine racemase * Synonym(s): == React...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MOADCST MOADCST] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAR ALAR] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Alanine racemase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[cys__L]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[MCOOH]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[ser__L]][c] '''+''' 1.0 [[MCOSH]][c]
+
** 1.0 [[ala__L]][c] '''<=>''' 1.0 [[ala__D]][c]
 
* With common name(s):
 
* With common name(s):
**
+
** 1.0 L-Alanine[c] '''<=>''' 1.0 D-Alanine[c]
 +
 
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0849]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* [[orthology]]:
** [[reaction added for biomass, from model l.plantarum]]
+
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
{{#set: in pathway=}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20249 20249]
{{#set: reconstruction category=manual}}
+
* BioCyc : META:ALARACECAT-RXN
{{#set: reconstruction source=reaction added for biomass, from model l.plantarum}}
+
* MetaNetX (MNX) Equation : MNXR95693
 +
* KEGG Reaction : R00401
 +
* EC Number : 5.1.1.1
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Alanine racemase}}
 +
{{#set: gene associated=EF0849}}
 +
{{#set: in pathway=map01100|map00473}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 15:33, 10 January 2018

Reaction ALAR

  • direction:
    • REVERSIBLE
  • common name:
    • Alanine racemase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Alanine[c] <=> 1.0 D-Alanine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:ALARACECAT-RXN
  • MetaNetX (MNX) Equation : MNXR95693
  • KEGG Reaction : R00401
  • EC Number : 5.1.1.1