Difference between revisions of "ARABRr"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00660 map00660] == * common_name: ** C5-Branched dibasic acid metabolism * Synonym(s): == Reaction...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/THRTRS THRTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Threonyl-tRNA synthetase * Synony...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00660 map00660] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/THRTRS THRTRS] ==
* common_name:
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* direction:
** C5-Branched dibasic acid metabolism
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** LEFT-TO-RIGHT
 +
* common name:
 +
** Threonyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''5''' reaction(s) found
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* With identifiers:
** [[ACHBS]]
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** 1.0 [[trnathr]][c] '''+''' 1.0 [[thr__L]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[thrtrna]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[ppi]][c]
** [[OMCDC]]
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* With common name(s):
** [[ACLS]]
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** 1.0 TRNA(Thr)[c] '''+''' 1.0 L-Threonine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 L-Threonyl-tRNA(Thr)[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Diphosphate[c]
** [[IPMD]]
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** [[ACLDC]]
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== Genes associated with this reaction  ==
== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
* '''16''' reaction(s) not found
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* [[EF2858]]
** [http://bigg.ucsd.edu/universal/reactions/CITMCOAHm CITMCOAHm]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
** [http://bigg.ucsd.edu/universal/reactions/SUCLm SUCLm]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
** [http://bigg.ucsd.edu/universal/reactions/OCAALD OCAALD]
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== Pathways  ==
** [http://bigg.ucsd.edu/universal/reactions/OMCDCm OMCDCm]
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* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
** [http://bigg.ucsd.edu/universal/reactions/MOSDC MOSDC]
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** '''23''' reactions found over '''49''' reactions in the full pathway
** [http://bigg.ucsd.edu/universal/reactions/CITCIb CITCIb]
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== Reconstruction information  ==
** [http://bigg.ucsd.edu/universal/reactions/CITMCOALm CITMCOALm]
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* [[orthology]]:
** [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
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** [[pantograph]]:
** [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
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*** [[e_coli_sstr_k12_substr_mg1655]]
** [http://bigg.ucsd.edu/universal/reactions/SUCOASm SUCOASm]
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*** [[l_plantarum_wcfs1]]
** [http://bigg.ucsd.edu/universal/reactions/SUCOAS SUCOAS]
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** [http://bigg.ucsd.edu/universal/reactions/APLh APLh]
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** [http://bigg.ucsd.edu/universal/reactions/APLm APLm]
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** [http://bigg.ucsd.edu/universal/reactions/ITCOALm ITCOALm]
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** [http://bigg.ucsd.edu/universal/reactions/ACAS_2ahbut ACAS_2ahbut]
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** [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
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== External links  ==
 
== External links  ==
{{#set: common_name=C5-Branched dibasic acid metabolism}}
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* Reactome : REACT_R-HSA-380002
{{#set: reaction found=5}}
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* MetaNetX (MNX) Equation : MNXR104848
{{#set: reaction not found=16}}
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* KEGG Reaction : R03663
 +
* EC Number : 6.1.1.3
 +
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Threonyl-tRNA synthetase}}
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{{#set: gene associated=EF2858}}
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{{#set: in pathway=map00970}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}

Revision as of 15:38, 10 January 2018

Reaction THRTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Threonyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 TRNA(Thr)[c] + 1.0 L-Threonine[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 L-Threonyl-tRNA(Thr)[c] + 1.0 AMP C10H12N5O7P[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-380002
  • MetaNetX (MNX) Equation : MNXR104848
  • KEGG Reaction : R03663
  • EC Number : 6.1.1.3