Difference between revisions of "NDPK2"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/akg akg] == * common name: ** 2-Oxoglutarate * Synonym(s): == Reaction(s) known to consume t...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLNS GLNS] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamine synthetase * Synonym(s): =...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/akg akg] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GLNS GLNS] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 2-Oxoglutarate
+
** Glutamine synthetase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[OXGDC]]
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* With identifiers:
* [[SACCD_c]]
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** 1.0 [[nh4]][c] '''+''' 1.0 [[glu__L]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[gln__L]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
* [[SEPHCHCS]]
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* With common name(s):
* [[PTRCTA]]
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** 1.0 Ammonium[c] '''+''' 1.0 L-Glutamate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 L-Glutamine[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
* [[EHGLAT]]
+
 
== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
* [[HSTPT]]
+
Genes have been associated with this reaction based on different elements listed below.
* [[LEUTAi]]
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* [[EF2159]]
* [[APTA1i]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
== Reaction(s) of unknown directionality ==
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
* [[GLYTA]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
* [[ICDHyr]]
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== Pathways  ==
* [[LEUTA]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[GLUDy]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[GLUDxi]]
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* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
* [[TRPTA]]
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** '''21''' reactions found over '''129''' reactions in the full pathway
* [[TYRTAi]]
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* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
* [[TYRTA]]
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** '''9''' reactions found over '''65''' reactions in the full pathway
* [[ALATA_L]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
* [[ILETA]]
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** '''104''' reactions found over '''715''' reactions in the full pathway
* [[SACCD2]]
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* [[map00910]]: [http://www.genome.jp/dbget-bin/www_bget?map00910 map00910]
* [[CYSTA]]
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** '''5''' reactions found over '''36''' reactions in the full pathway
* [[VALTA]]
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* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
* [[ICDHx]]
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** '''22''' reactions found over '''93''' reactions in the full pathway
* [[ASPTA]]
+
== Reconstruction information  ==
* [[2S6HCCi]]
+
* [[orthology]]:
* [[PHETA1]]
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** [[pantograph]]:
* [[HSTPTr]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: common name=2-Oxoglutarate}}
+
* RHEA:
{{#set: consumed by=OXGDC|SACCD_c|SEPHCHCS|PTRCTA|EHGLAT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16169 16169]
{{#set: produced by=HSTPT|LEUTAi|APTA1i}}
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* BioCyc : META:GLUTAMINESYN-RXN
{{#set: consumed or produced by=GLYTA|ICDHyr|LEUTA|GLUDy|GLUDxi|TRPTA|TYRTAi|TYRTA|ALATA_L|ILETA|SACCD2|CYSTA|VALTA|ICDHx|ASPTA|2S6HCCi|PHETA1|HSTPTr}}
+
* MetaNetX (MNX) Equation : MNXR100024
 +
* KEGG Reaction : R00253
 +
* EC Number : 6.3.1.2
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glutamine synthetase}}
 +
{{#set: gene associated=EF2159}}
 +
{{#set: in pathway=map01100|map00630|map00220|map01120|map00910|map00250}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 15:40, 10 January 2018

Reaction GLNS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamine synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Ammonium[c] + 1.0 L-Glutamate[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 L-Glutamine[c] + 1.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GLUTAMINESYN-RXN
  • MetaNetX (MNX) Equation : MNXR100024
  • KEGG Reaction : R00253
  • EC Number : 6.3.1.2