Difference between revisions of "Pydxn"

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(Created page with "Category:Gene == Gene EF0949 == * Synonym(s): == Reactions associated == * PBUTT ** pantograph-b_subtilis_subsp_subtilis_str168 * PTA2 ** pantograph-[...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] == * direction: ** REVERSIBLE * common name: ** Glutamate racemase * Synonym(s): == Rea...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene EF0949 ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUR GLUR] ==
 +
* direction:
 +
** REVERSIBLE
 +
* common name:
 +
** Glutamate racemase
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[PBUTT]]
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* With identifiers:
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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** 1.0 [[glu__D]][c] '''<=>''' 1.0 [[glu__L]][c]
* [[PTA2]]
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* With common name(s):
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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** 1.0 D-Glutamate[c] '''<=>''' 1.0 L-Glutamate[c]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
 
* [[PTAr]]
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF1121]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
== Pathways associated ==
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== Pathways ==
* [[map01100]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[map00720]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[map00640]]
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* [[map00471]]: [http://www.genome.jp/dbget-bin/www_bget?map00471 map00471]
* [[map01120]]
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** '''4''' reactions found over '''10''' reactions in the full pathway
* [[map00650]]
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== Reconstruction information  ==
* [[map00430]]
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* [[orthology]]:
* [[map00620]]
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** [[pantograph]]:
* [[map00680]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
* [[map01200]]
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*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: reaction associated=PBUTT|PTA2|PTAr}}
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* RHEA:
{{#set: pathway associated=map01100|map00720|map00640|map01120|map00650|map00430|map00620|map00680|map01200}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12813 12813]
 +
* BioCyc : META:GLUTRACE-RXN
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* MetaNetX (MNX) Equation : MNXR100288
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* KEGG Reaction : R00260
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* EC Number : 5.1.1.3
 +
{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glutamate racemase}}
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{{#set: gene associated=EF1121}}
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{{#set: in pathway=map01100|map00471}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 15:41, 10 January 2018

Reaction GLUR

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamate racemase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glutamate[c] <=> 1.0 L-Glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GLUTRACE-RXN
  • MetaNetX (MNX) Equation : MNXR100288
  • KEGG Reaction : R00260
  • EC Number : 5.1.1.3