Difference between revisions of "ASNN"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadph nadph] == * common name: ** Nicotinamide adenine dinucleotide phosphate - reduced * Syn...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIK1 URIK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine kinase ATPUridine * Synon...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/nadph nadph] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/URIK1 URIK1] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Nicotinamide adenine dinucleotide phosphate - reduced
+
** Uridine kinase  ATPUridine
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[FLVR_1]]
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* With identifiers:
* [[DPR]]
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** 1.0 [[atp]][c] '''+''' 1.0 [[uri]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[ump]][c] '''+''' 1.0 [[h]][c]
* [[MSAR]]
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* With common name(s):
* [[DKGLCNR2y]]
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Uridine[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 UMP C9H11N2O9P[c] '''+''' 1.0 H+[c]
* [[OPMEACPR]]
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* [[MTHFR3]]
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== Genes associated with this reaction  ==
* [[DHPTDNR]]
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Genes have been associated with this reaction based on different elements listed below.
* [[G5SD]]
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* [[EF0825]]
* [[EAR141y]]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
* [[KAS2]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
* [[HPYRRy]]
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== Pathways  ==
* [[CSPMDDH]]
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* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
* [[EAR180y]]
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** '''82''' reactions found over '''244''' reactions in the full pathway
* [[DHDPRy]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[KAS17]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[2DGULRy]]
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* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
* [[FAS120]]
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** '''22''' reactions found over '''72''' reactions in the full pathway
* [[EAR161y]]
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== Reconstruction information  ==
* [[EAR120y]]
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* [[orthology]]:
* [[P5CR]]
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** [[pantograph]]:
* [[3OAR161]]
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*** [[l_plantarum_wcfs1]]
* [[OGMEACPR]]
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*** [[b_subtilis_subsp_subtilis_str168]]
* [[TRDR]]
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* [[FAS140]]
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* [[3OAR181]]
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* [[3OAR121]]
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* [[EAR60y]]
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* [[ALR2]]
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* [[EAR181y]]
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* [[FAS100]]
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* [[GAPDi_nadp]]
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* [[3OAR141]]
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* [[EPMEACPR]]
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* [[HBUR1_manual]]
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* [[KAS13]]
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* [[EAR40y]]
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* [[TDPDRR]]
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* [[EAR140y]]
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* [[GMPR]]
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* [[FAS80_L]]
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* [[DKGLCNR1]]
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* [[UAPGR]]
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* [[EAR160y]]
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* [[2DGULRGy]]
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* [[FMNRy]]
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* [[EAR121y]]
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* [[FLVR]]
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* [[SACCD_c]]
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* [[EGMEACPR]]
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* [[GLYCLTDy]]
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* [[EAR100y]]
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* [[EAR80y]]
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== Reaction(s) known to produce the compound ==
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* [[SSALy]]
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* [[ALDD2y]]
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* [[ALDD3y]]
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* [[GND]]
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* [[ME2]]
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* [[AASDH1_c]]
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== Reaction(s) of unknown directionality ==
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* [[G6PDH2r]]
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* [[3OAR60]]
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* [[DHFR]]
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* [[DHFOR2]]
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* [[3OAR80]]
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* [[RBT5PDHy]]
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* [[ASAD]]
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* [[HMGCOAR]]
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* [[3OAR40]]
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* [[ALCD2y]]
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* [[GLUDy]]
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* [[SHK3Dr]]
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* [[KARA1]]
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* [[KARA2]]
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* [[3OAR160]]
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* [[DSERDHr]]
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* [[GTHOr]]
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* [[ATHRDHr]]
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* [[3OAR180]]
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* [[3OAR120]]
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* [[ICDHyr]]
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* [[3OAR100]]
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* [[5DGLCNR]]
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* [[3OAR140]]
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* [[LSERDHr]]
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* [[G3PD2]]
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* [[HSDy]]
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* [[MTHFD]]
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* [[SACCD1]]
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* [[ARABRr]]
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== External links  ==
 
== External links  ==
{{#set: common name=Nicotinamide adenine dinucleotide phosphate - reduced}}
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* RHEA:
{{#set: consumed by=FLVR_1|DPR|MSAR|DKGLCNR2y|OPMEACPR|MTHFR3|DHPTDNR|G5SD|EAR141y|KAS2|HPYRRy|CSPMDDH|EAR180y|DHDPRy|KAS17|2DGULRy|FAS120|EAR161y|EAR120y|P5CR|3OAR161|OGMEACPR|TRDR|FAS140|3OAR181|3OAR121|EAR60y|ALR2|EAR181y|FAS100|GAPDi_nadp|3OAR141|EPMEACPR|HBUR1_manual|KAS13|EAR40y|TDPDRR|EAR140y|GMPR|FAS80_L|DKGLCNR1|UAPGR|EAR160y|2DGULRGy|FMNRy|EAR121y|FLVR|SACCD_c|EGMEACPR|GLYCLTDy|EAR100y|EAR80y}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16825 16825]
{{#set: produced by=SSALy|ALDD2y|ALDD3y|GND|ME2|AASDH1_c}}
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* BioCyc : META:URIDINEKIN-RXN
{{#set: consumed or produced by=G6PDH2r|3OAR60|DHFR|DHFOR2|3OAR80|RBT5PDHy|ASAD|HMGCOAR|3OAR40|ALCD2y|GLUDy|SHK3Dr|KARA1|KARA2|3OAR160|DSERDHr|GTHOr|ATHRDHr|3OAR180|3OAR120|ICDHyr|3OAR100|5DGLCNR|3OAR140|LSERDHr|G3PD2|HSDy|MTHFD|SACCD1|ARABRr}}
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* MetaNetX (MNX) Equation : MNXR105162
 +
* KEGG Reaction : R00964
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* EC Number : 2.7.1.213
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Uridine kinase  ATPUridine }}
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{{#set: gene associated=EF0825}}
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{{#set: in pathway=map00240|map01100|map00983}}
 +
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 15:41, 10 January 2018

Reaction URIK1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uridine kinase ATPUridine
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Uridine[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 UMP C9H11N2O9P[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:URIDINEKIN-RXN
  • MetaNetX (MNX) Equation : MNXR105162
  • KEGG Reaction : R00964
  • EC Number : 2.7.1.213