Difference between revisions of "TransportSeed ser L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRAMPC PRAMPC] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosyl-AMP cyclohydrolase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OCBT_1 OCBT_1] == * direction: ** REVERSIBLE * common name: ** Ornithine carbamoyltransferase * Syn...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PRAMPC PRAMPC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OCBT_1 OCBT_1] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Phosphoribosyl-AMP cyclohydrolase
+
** Ornithine carbamoyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[prbamp]][c] '''=>''' 1.0 [[prfp]][c]
+
** 1.0 [[cbp]][c] '''+''' 1.0 [[orn__L]][c] '''<=>''' 1.0 [[citr__L]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 1-(5-Phosphoribosyl)-AMP[c] '''=>''' 1.0 1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
+
** 1.0 Carbamoyl phosphate[c] '''+''' 1.0 L Ornithine C5H13N2O2[c] '''<=>''' 1.0 L-Citrulline[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0105]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
 
−
** '''17''' reactions found over '''90''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''83''' reactions found over '''228''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* [[orthology]]:
−
** [[meneco]]:
+
** [[pantograph]]:
−
*** [[added for gapfilling]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.1.3.3
 +
* BioCyc : META:ORNCARBAMTRANSFER-RXN
 +
* MetaNetX (MNX) Equation : MNXR102137
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19513 19513]
−
* EC Number : 3.5.4.19
+
* Reactome : REACT_R-ATH-70560
−
* MetaNetX (MNX) Equation : MNXR103154
+
* KEGG Reaction : R01398
−
* KEGG Reaction : R04037
+
{{#set: direction=REVERSIBLE}}
−
* BioCyc : META:HISTCYCLOHYD-RXN
+
{{#set: common name=Ornithine carbamoyltransferase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: gene associated=EF0105}}
−
{{#set: common name=Phosphoribosyl-AMP cyclohydrolase}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=map01100|map00340|map01110|map01230}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}
−
{{#set: reconstruction source=added for gapfilling}}
+

Revision as of 16:41, 10 January 2018

Reaction OCBT_1

  • direction:
    • REVERSIBLE
  • common name:
    • Ornithine carbamoyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Carbamoyl phosphate[c] + 1.0 L Ornithine C5H13N2O2[c] <=> 1.0 L-Citrulline[c] + 1.0 H+[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.1.3.3
  • BioCyc : META:ORNCARBAMTRANSFER-RXN
  • MetaNetX (MNX) Equation : MNXR102137
  • RHEA:
  • Reactome : REACT_R-ATH-70560
  • KEGG Reaction : R01398




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