Difference between revisions of "2me4p"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] == * direction: ** REVERSIBLE * common name: ** Aconitase (half-reaction A, Citrate...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PYROX PYROX] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyrimidine oxygenase * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PYROX PYROX] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Aconitase (half-reaction A, Citrate hydro-lyase)
+
** Pyrimidine oxygenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[cit]][c] '''<=>''' 1.0 [[acon_C]][c] '''+''' 1.0 [[h2o]][c]
+
** 1.0 [[o2]][c] '''+''' 1.0 [[ura]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[uracp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Citrate[c] '''<=>''' 1.0 Cis-Aconitate[c] '''+''' 1.0 H2O H2O[c]
+
** 1.0 O2 O2[c] '''+''' 1.0 Uracil[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Ureidoacrylate peracid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 
** '''25''' reactions found over '''129''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''111''' reactions found over '''715''' reactions in the full pathway
 
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 
** '''25''' reactions found over '''80''' reactions in the full pathway
 
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 
** '''17''' reactions found over '''157''' reactions in the full pathway
 
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 
** '''9''' reactions found over '''70''' reactions in the full pathway
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''156''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[gap-filling]]:
 
* [[gap-filling]]:
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*** [[added for gapfilling]]
 
*** [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR103383
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10228 10228]
+
{{#set: direction=LEFT-TO-RIGHT}}
* EC Number : 4.2.1.3
+
{{#set: common name=Pyrimidine oxygenase}}
* MetaNetX (MNX) Equation : MNXR95386
+
{{#set: in pathway=}}
* KEGG Reaction : R01325
+
* BioCyc : META:ACONITATEDEHYDR-RXN
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Aconitase (half-reaction A, Citrate hydro-lyase)}}
+
{{#set: in pathway=map01100|map00630|map01110|map01120|map01210|map00720|map00020|map01130}}
+
 
{{#set: reconstruction category=gap-filling}}
 
{{#set: reconstruction category=gap-filling}}
 
{{#set: reconstruction tool=meneco}}
 
{{#set: reconstruction tool=meneco}}
 
{{#set: reconstruction source=added for gapfilling}}
 
{{#set: reconstruction source=added for gapfilling}}

Revision as of 15:42, 10 January 2018

Reaction PYROX

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyrimidine oxygenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 O2 O2[c] + 1.0 Uracil[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] + 1.0 H+[c] => 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Ureidoacrylate peracid[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103383