Difference between revisions of "Octa"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HISTD HISTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Histidinol dehydrogenase * Synonym(...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCabc PTRCabc] == * direction: ** LEFT-TO-RIGHT * common name: ** Putrescine transport via ABC sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/HISTD HISTD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PTRCabc PTRCabc] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Histidinol dehydrogenase
+
** Putrescine transport via ABC system
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[histd]][c] '''+''' 2.0 [[nad]][c] '''=>''' 3.0 [[h]][c] '''+''' 1.0 [[his__L]][c] '''+''' 2.0 [[nadh]][c]
+
** 1.0 [[ptrc]][e] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[ptrc]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 L-Histidinol[c] '''+''' 2.0 Nicotinamide adenine dinucleotide[c] '''=>''' 3.0 H+[c] '''+''' 1.0 L-Histidine[c] '''+''' 2.0 Nicotinamide adenine dinucleotide - reduced[c]
+
** 1.0 Putrescine[e] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Putrescine[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF2651]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2650]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2649]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
* [[EF2652]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
 
−
** '''17''' reactions found over '''90''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''83''' reactions found over '''228''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* [[orthology]]:
−
** [[meneco]]:
+
** [[pantograph]]:
−
*** [[added for gapfilling]]
+
*** [[l_plantarum_wcfs1]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20641 20641]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29995#1 29995#1]
−
* EC Number : 1.1.1.23
+
* MetaNetX (MNX) Equation : MNXR103338
−
* MetaNetX (MNX) Equation : MNXR100587
+
* EC Number : 3.6.3.31
−
* KEGG Reaction : R01158
+
* BioCyc : META:ABC-25-RXN
−
* BioCyc : META:RXN-8001
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Histidinol dehydrogenase}}
+
{{#set: common name=Putrescine transport via ABC system}}
−
{{#set: in pathway=map01100|map00340|map01110|map01230}}
+
{{#set: gene associated=EF2651|EF2650|EF2649|EF2652}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=l_plantarum_wcfs1}}

Revision as of 16:45, 10 January 2018

Reaction PTRCabc

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Putrescine transport via ABC system
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Putrescine[e] + 1.0 H2O H2O[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 Phosphate[c] + 1.0 Putrescine[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR103338
  • EC Number : 3.6.3.31
  • BioCyc : META:ABC-25-RXN




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