Difference between revisions of "SERASr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LACZ LACZ] == * direction: ** LEFT-TO-RIGHT * common name: ** B-galactosidase * Synonym(s): == Rea...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MANPGH MANPGH] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-O-alpha-mannosyl-6-phosphate-D-...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/LACZ LACZ] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MANPGH MANPGH] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** B-galactosidase
+
** 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[lcts]][c] '''=>''' 1.0 [[gal]][c] '''+''' 1.0 [[glc__D]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[man6pglyc]][c] '''=>''' 1.0 [[man6p]][c] '''+''' 1.0 [[glyc__R]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 Lactose C12H22O11[c] '''=>''' 1.0 D-Galactose[c] '''+''' 1.0 D-Glucose[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 2(alpha-D-Mannosyl-6-phosphate)-D-glycerate[c] '''=>''' 1.0 D-Mannose 6-phosphate[c] '''+''' 1.0 (R)-Glycerate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1238]]
+
* [[EF1707]]
** MANUAL
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00600]]: [http://www.genome.jp/dbget-bin/www_bget?map00600 map00600]
 
** '''1''' reactions found over '''37''' reactions in the full pathway
 
* [[map00604]]: [http://www.genome.jp/dbget-bin/www_bget?map00604 map00604]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
 
** '''17''' reactions found over '''67''' reactions in the full pathway
 
* [[map00511]]: [http://www.genome.jp/dbget-bin/www_bget?map00511 map00511]
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
* [[map00531]]: [http://www.genome.jp/dbget-bin/www_bget?map00531 map00531]
 
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* [[orthology]]:
** [[this was a reaction occurring in the perisplasm of e. coli]]
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** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 
== External links  ==
 
== External links  ==
* RHEA:
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* BioCyc : META:RXN0-5216
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10076 10076]
+
* MetaNetX (MNX) Equation : MNXR101397
* MetaNetX (MNX) Equation : MNXR101000
+
* KEGG Reaction : R09645
* KEGG Reaction : R01100
+
* EC Number : 3.2.1.170
* EC Number : 3.2.1.108
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=B-galactosidase}}
+
{{#set: common name=2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase}}
{{#set: gene associated=EF1238}}
+
{{#set: gene associated=EF1707}}
{{#set: in pathway=map01100|map00600|map00604|map00052|map00511|map00531}}
+
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=this was a reaction occurring in the perisplasm of e. coli}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 15:47, 10 January 2018

Reaction MANPGH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-O-alpha-mannosyl-6-phosphate-D-glycerate hydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 2(alpha-D-Mannosyl-6-phosphate)-D-glycerate[c] => 1.0 D-Mannose 6-phosphate[c] + 1.0 (R)-Glycerate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • BioCyc : META:RXN0-5216
  • MetaNetX (MNX) Equation : MNXR101397
  • KEGG Reaction : R09645
  • EC Number : 3.2.1.170