Difference between revisions of "Ichor"
From metabolic_network
(Created page with "Category:Gene == Gene EF3270 == * Synonym(s): == Reactions associated == * GTHOr ** pantograph-l_plantarum_wcfs1 ** pantograph-e_coli_sstr_k12_substr_mg...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD5 NTD5] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (dTMP) * Synonym(s):...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD5 NTD5] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
| + | * common name: | ||
| + | ** 5'-nucleotidase (dTMP) | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** [[ | + | ** 1.0 [[h2o]][c] '''+''' 1.0 [[dtmp]][c] '''=>''' 1.0 [[thymd]][c] '''+''' 1.0 [[pi]][c] |
| + | * With common name(s): | ||
| + | ** 1.0 H2O H2O[c] '''+''' 1.0 DTMP C10H13N2O8P[c] '''=>''' 1.0 Thymidine C10H14N2O5[c] '''+''' 1.0 Phosphate[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF0822]] | ||
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| − | == Pathways | + | * [[EF0062]] |
| − | * [[ | + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] |
| + | == Pathways == | ||
| + | * [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240] | ||
| + | ** '''82''' reactions found over '''244''' reactions in the full pathway | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[e_coli_sstr_k12_substr_mg1655]] | ||
| + | *** [[b_subtilis_subsp_subtilis_str168]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: pathway | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11080 11080] |
| + | * BioCyc : META:THYMIDYLATE-5-PHOSPHATASE-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR102035 | ||
| + | * KEGG Reaction : R01569 | ||
| + | * EC Number : 3.1.3.35 | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=5'-nucleotidase (dTMP)}} | ||
| + | {{#set: gene associated=EF0822|EF0062}} | ||
| + | {{#set: in pathway=map00240|map01100}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}} | ||
Revision as of 15:51, 10 January 2018
Contents
Reaction NTD5
- direction:
- LEFT-TO-RIGHT
- common name:
- 5'-nucleotidase (dTMP)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 H2O H2O[c] + 1.0 DTMP C10H13N2O8P[c] => 1.0 Thymidine C10H14N2O5[c] + 1.0 Phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map00240: map00240
- 82 reactions found over 244 reactions in the full pathway
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
Reconstruction information
External links
- RHEA:
- BioCyc : META:THYMIDYLATE-5-PHOSPHATASE-RXN
- MetaNetX (MNX) Equation : MNXR102035
- KEGG Reaction : R01569
- EC Number : 3.1.3.35
