Difference between revisions of "Iscu 4fe4s"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RBK RBK] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribokinase * Synonym(s): == Reaction F...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OGMEACPD OGMEACPD] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-Oxo-glutaryl-[ACP] methyl e...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/RBK RBK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OGMEACPD OGMEACPD] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Ribokinase
+
** 3-Oxo-glutaryl-[ACP] methyl ester dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[rib__D]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[r5p]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[hgmeACP]][c] '''=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[egmeACP]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 D-Ribose[c] '''=>''' 1.0 H+[c] '''+''' 1.0 Alpha-D-Ribose 5-phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester[c] '''=>''' 1.0 H2O H2O[c] '''+''' 1.0 Enoylglutaryl-[acyl-carrier protein] methyl ester[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF2961]]
+
* [[EF0284]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF2878]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''26''' reactions found over '''69''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
 +
** '''26''' reactions found over '''67''' reactions in the full pathway
 +
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
 +
** '''65''' reactions found over '''160''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR103431
+
* BioCyc : META:RXN-11477
* EC Number : 2.7.1.15
+
* MetaNetX (MNX) Equation : MNXR102159
 +
* KEGG Reaction : R10117
 +
* EC Number : 4.2.1.59
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Ribokinase}}
+
{{#set: common name=3-Oxo-glutaryl-[ACP] methyl ester dehydratase}}
{{#set: gene associated=EF2961}}
+
{{#set: gene associated=EF0284|EF2878}}
{{#set: in pathway=map00030}}
+
{{#set: in pathway=map01100|map00780|map00061}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:03, 10 January 2018

Reaction OGMEACPD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-Oxo-glutaryl-[ACP] methyl ester dehydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester[c] => 1.0 H2O H2O[c] + 1.0 Enoylglutaryl-[acyl-carrier protein] methyl ester[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • BioCyc : META:RXN-11477
  • MetaNetX (MNX) Equation : MNXR102159
  • KEGG Reaction : R10117
  • EC Number : 4.2.1.59
"3-Oxo-glutaryl-[ACP] methyl ester dehydratase" cannot be used as a page name in this wiki.