Difference between revisions of "2shchc"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK8 NDPK8] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:dAD...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RNTR2 RNTR2] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribonucleoside triphosphate reducta...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK8 NDPK8] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RNTR2 RNTR2] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Nucleoside-diphosphate kinase (ATP:dADP)
+
** Ribonucleoside triphosphate reductase  GTP
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[dadp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[datp]][c]
+
** 1.0 [[trdrd]][c] '''+''' 1.0 [[gtp]][c] '''=>''' 1.0 [[dgtp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[trdox]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 DADP C10H12N5O9P2[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DATP C10H12N5O12P3[c]
+
** 1.0 Reduced thioredoxin[c] '''+''' 1.0 GTP C10H12N5O14P3[c] '''=>''' 1.0 DGTP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Oxidized thioredoxin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0228]]
+
* [[EF1491]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
* [[EF1036]]
+
* [[EF2754]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** '''83''' reactions found over '''244''' reactions in the full pathway
+
** '''82''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
−
** '''98''' reactions found over '''298''' reactions in the full pathway
+
** '''97''' reactions found over '''298''' reactions in the full pathway
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[e_coli_sstr_k12_substr_mg1655]]
 
 
*** [[l_plantarum_wcfs1]]
 
*** [[l_plantarum_wcfs1]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR104073
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27674 27674]
+
* KEGG Reaction : R02020
−
* BioCyc : META:DADPKIN-RXN
+
* EC Number : 1.17.4.2
−
* MetaNetX (MNX) Equation : MNXR101940
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* KEGG Reaction : R01137
+
{{#set: common name=Ribonucleoside triphosphate reductase  GTP }}
−
* EC Number : 2.7.4.6
+
{{#set: gene associated=EF1491|EF2754}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=map00240|map01100|map00230}}
−
{{#set: common name=Nucleoside-diphosphate kinase (ATP:dADP)}}
+
−
{{#set: gene associated=EF0228|EF1036}}
+
−
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=l_plantarum_wcfs1}}

Revision as of 16:06, 10 January 2018

Reaction RNTR2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ribonucleoside triphosphate reductase GTP
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Reduced thioredoxin[c] + 1.0 GTP C10H12N5O14P3[c] => 1.0 DGTP C10H12N5O13P3[c] + 1.0 H2O H2O[c] + 1.0 Oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104073
  • KEGG Reaction : R02020
  • EC Number : 1.17.4.2




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