Difference between revisions of "2dhp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TYRTRS TYRTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Tyrosyl-tRNA synthetase * Synonym...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/URIK3 URIK3] == * direction: ** LEFT-TO-RIGHT * common name: ** Uridine kinase (ITP:Uridine) * Syno...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/TYRTRS TYRTRS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/URIK3 URIK3] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Tyrosyl-tRNA synthetase
+
** Uridine kinase (ITP:Uridine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[trnatyr]][c] '''+''' 1.0 [[tyr__L]][c] '''=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[tyrtrna]][c]
+
** 1.0 [[itp]][c] '''+''' 1.0 [[uri]][c] '''=>''' 1.0 [[ump]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[idp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 TRNA(Tyr)[c] '''+''' 1.0 L-Tyrosine[c] '''=>''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 L-Tyrosyl-tRNA(Tyr)[c]
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** 1.0 ITP C10H11N4O14P3[c] '''+''' 1.0 Uridine[c] '''=>''' 1.0 UMP C9H11N2O9P[c] '''+''' 1.0 H+[c] '''+''' 1.0 IDP C10H11N4O11P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF0633]]
+
* [[EF0825]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
* [[EF1739]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
== Pathways  ==
 
== Pathways  ==
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''23''' reactions found over '''49''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 +
** '''22''' reactions found over '''72''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
*** [[e_coli_sstr_k12_substr_mg1655]]
 
 
*** [[l_plantarum_wcfs1]]
 
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
* Reactome : REACT_R-HSA-379980
+
* MetaNetX (MNX) Equation : MNXR105164
* MetaNetX (MNX) Equation : MNXR105001
+
* KEGG Reaction : R00970
* KEGG Reaction : R02918
+
* EC Number : 2.7.1.48
* EC Number : 6.1.1.1
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Tyrosyl-tRNA synthetase}}
+
{{#set: common name=Uridine kinase (ITP:Uridine)}}
{{#set: gene associated=EF0633|EF1739}}
+
{{#set: gene associated=EF0825}}
{{#set: in pathway=map00970}}
+
{{#set: in pathway=map01100|map00240|map00983}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}
+
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:06, 10 January 2018

Reaction URIK3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uridine kinase (ITP:Uridine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ITP C10H11N4O14P3[c] + 1.0 Uridine[c] => 1.0 UMP C9H11N2O9P[c] + 1.0 H+[c] + 1.0 IDP C10H11N4O11P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR105164
  • KEGG Reaction : R00970
  • EC Number : 2.7.1.48