Difference between revisions of "Uri"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/dcdp dcdp] == * common name: ** DCDP C9H12N3O10P2 * Synonym(s): == Reaction(s) known to cons...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDK2 CYTDK2] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidine kinase (GTP) * Synonym(s...")
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/dcdp dcdp] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTDK2 CYTDK2] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** DCDP C9H12N3O10P2
+
** Cytidine kinase (GTP)
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
== Reaction(s) known to produce the compound ==
+
* With identifiers:
* [[RNDR3]]
+
** 1.0 [[cytd]][c] '''+''' 1.0 [[gtp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[gdp]][c] '''+''' 1.0 [[cmp]][c]
* [[NADK4]]
+
* With common name(s):
== Reaction(s) of unknown directionality ==
+
** 1.0 Cytidine[c] '''+''' 1.0 GTP C10H12N5O14P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 GDP C10H12N5O11P2[c] '''+''' 1.0 CMP C9H12N3O8P[c]
* [[CYTK2]]
+
 
* [[NDPK7]]
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0825]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''82''' reactions found over '''244''' reactions in the full pathway
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
 +
** '''22''' reactions found over '''72''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[e_coli_sstr_k12_substr_mg1655]]
 +
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
{{#set: common name=DCDP C9H12N3O10P2}}
+
* RHEA:
{{#set: produced by=RNDR3|NADK4}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28162 28162]
{{#set: consumed or produced by=CYTK2|NDPK7}}
+
* BioCyc : META:CYTIDINEKIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR97042
 +
* KEGG Reaction : R00517
 +
* EC Number : 2.7.1.213
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Cytidine kinase (GTP)}}
 +
{{#set: gene associated=EF0825}}
 +
{{#set: in pathway=map00240|map01100|map00983}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:11, 10 January 2018

Reaction CYTDK2

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytidine kinase (GTP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Cytidine[c] + 1.0 GTP C10H12N5O14P3[c] => 1.0 H+[c] + 1.0 GDP C10H12N5O11P2[c] + 1.0 CMP C9H12N3O8P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:CYTIDINEKIN-RXN
  • MetaNetX (MNX) Equation : MNXR97042
  • KEGG Reaction : R00517
  • EC Number : 2.7.1.213