Difference between revisions of "PGGT4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AOXSr AOXSr] == * direction: ** REVERSIBLE * common name: ** 8-amino-7-oxononanoate synthase * Syno...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP5ppc MDDCP5ppc] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/AOXSr AOXSr] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP5ppc MDDCP5ppc] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
* common name:
+
** 8-amino-7-oxononanoate synthase
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[ala__L]][c] '''+''' 1.0 [[pmcoa]][c] '''<=>''' 1.0 [[8aonn]][c] '''+''' 1.0 [[coa]][c] '''+''' 1.0 [[co2]][c]
+
** 1.0 [[murein5p3p]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[ala__D]][c] '''+''' 1.0 [[murein4p3p]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 L-Alanine[c] '''+''' 1.0 Pimeloyl-CoA[c] '''<=>''' 1.0 8-Amino-7-oxononanoate[c] '''+''' 1.0 Coenzyme A[c] '''+''' 1.0 CO2 CO2[c]
+
** 1.0 Two linked disacharide pentapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 D-Alanine[c] '''+''' 1.0 Two linked disacharide tetrapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF3129]]
 +
** MANUAL
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
 
** '''30''' reactions found over '''67''' reactions in the full pathway
 
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
** '''111''' reactions found over '''715''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* [[manual]]:
** [[meneco]]:
+
** [[this was a reaction occurring in the perisplasm of e. coli]]
*** [[added for gapfilling]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20712 20712]
+
{{#set: gene associated=EF3129}}
* EC Number : 2.3.1.47
+
{{#set: in pathway=}}
* MetaNetX (MNX) Equation : MNXR95854
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{{#set: reconstruction category=manual}}
* KEGG Reaction : R03210
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{{#set: reconstruction source=this was a reaction occurring in the perisplasm of e. coli}}
* BioCyc : META:7KAPSYN-RXN
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=8-amino-7-oxononanoate synthase}}
+
{{#set: in pathway=map01100|map00780|map01120}}
+
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction source=added for gapfilling}}
+

Revision as of 16:13, 10 January 2018

Reaction MDDCP5ppc

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Two linked disacharide pentapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c] + 1.0 H2O H2O[c] => 1.0 D-Alanine[c] + 1.0 Two linked disacharide tetrapeptide and tripeptide murein units (uncrosslinked, middle of chain)[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links