Difference between revisions of "3OAS60"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK5 NDPK5] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:dGD...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTRS TRPTRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophanyl-tRNA synthetase * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK5 NDPK5] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/TRPTRS TRPTRS] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Nucleoside-diphosphate kinase (ATP:dGDP)
+
** Tryptophanyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[atp]][c] '''+''' 1.0 [[dgdp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[dgtp]][c]
+
** 1.0 [[atp]][c] '''+''' 1.0 [[trp__L]][c] '''+''' 1.0 [[trnatrp]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[trptrna]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 DGDP C10H12N5O10P2[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 DGTP C10H12N5O13P3[c]
+
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 L-Tryptophan[c] '''+''' 1.0 TRNA(Trp)[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 L-Tryptophanyl-tRNA(Trp)[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1036]]
+
* [[EF2679]]
 +
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF2228]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
** [[pantograph]]-[[l_plantarum_wcfs1]]
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
−
* [[EF0228]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
−
** '''83''' reactions found over '''244''' reactions in the full pathway
+
** '''23''' reactions found over '''49''' reactions in the full pathway
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
−
** '''98''' reactions found over '''298''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''156''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
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*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[l_plantarum_wcfs1]]
 
*** [[l_plantarum_wcfs1]]
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* Reactome : REACT_R-HSA-379977
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27690 27690]
+
* MetaNetX (MNX) Equation : MNXR104948
−
* BioCyc : META:DGDPKIN-RXN
+
* KEGG Reaction : R03664
−
* MetaNetX (MNX) Equation : MNXR96118
+
* EC Number : 6.1.1.2
−
* KEGG Reaction : R01857
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* EC Number : 2.7.4.6
+
{{#set: common name=Tryptophanyl-tRNA synthetase}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=EF2679|EF2228}}
−
{{#set: common name=Nucleoside-diphosphate kinase (ATP:dGDP)}}
+
{{#set: in pathway=map00970}}
−
{{#set: gene associated=EF1036|EF0228}}
+
−
{{#set: in pathway=map00240|map01100|map01110|map00230|map01130}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1}}

Revision as of 16:13, 10 January 2018

Reaction TRPTRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Tryptophanyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 L-Tryptophan[c] + 1.0 TRNA(Trp)[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 Diphosphate[c] + 1.0 L-Tryptophanyl-tRNA(Trp)[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-379977
  • MetaNetX (MNX) Equation : MNXR104948
  • KEGG Reaction : R03664
  • EC Number : 6.1.1.2




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