Difference between revisions of "UAGPT3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTK2 CYTK2] == * direction: ** REVERSIBLE * common name: ** Cytidylate kinase (dCMP) * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OCTNLL OCTNLL] == * direction: ** LEFT-TO-RIGHT * common name: ** Octanoate non-lipoylated apo doma...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTK2 CYTK2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OCTNLL OCTNLL] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Cytidylate kinase (dCMP)
+
** Octanoate non-lipoylated apo domain ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[dcmp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[dcdp]][c] '''+''' 1.0 [[adp]][c]
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** 1.0 [[atp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[octa]][c] '''=>''' 1.0 [[amp]][c] '''+''' 1.0 [[octapb]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 DCMP C9H12N3O7P[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 DCDP C9H12N3O10P2[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 H+[c] '''+''' 1.0 Octanoate (n-C8:0)[c] '''=>''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Octanoate (protein bound)[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[EF1547]]
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* [[EF2741]]
** [[pantograph]]-[[l_plantarum_wcfs1]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 +
* [[EF0650]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
** '''83''' reactions found over '''244''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
*** [[l_plantarum_wcfs1]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR102155
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25094 25094]
+
{{#set: direction=LEFT-TO-RIGHT}}
* BioCyc : META:RXN-7913
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{{#set: common name=Octanoate non-lipoylated apo domain ligase}}
* MetaNetX (MNX) Equation : MNXR97053
+
{{#set: gene associated=EF2741|EF0650}}
* KEGG Reaction : R01665
+
{{#set: in pathway=}}
* EC Number : 2.7.4.13
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{{#set: direction=REVERSIBLE}}
+
{{#set: common name=Cytidylate kinase (dCMP)}}
+
{{#set: gene associated=EF1547}}
+
{{#set: in pathway=map01100|map00240}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:14, 10 January 2018

Reaction OCTNLL

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Octanoate non-lipoylated apo domain ligase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 H+[c] + 1.0 Octanoate (n-C8:0)[c] => 1.0 AMP C10H12N5O7P[c] + 1.0 Octanoate (protein bound)[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR102155