Difference between revisions of "ALAALAr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/X00002 X00002] == * direction: ** LEFT-TO-RIGHT * common name: ** Lumped reaction for synthesis of...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GK2 GK2] == * direction: ** REVERSIBLE * common name: ** Guanylate kinase GMPdATP * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/X00002 X00002] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GK2 GK2] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
** Lumped reaction for synthesis of pime
+
** Guanylate kinase  GMPdATP
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h]][c] '''+''' 1.0 [[oaa]][c] '''+''' 2.0 [[h2o]][c] '''+''' 1.0 [[pyr]][c] '''=>''' 1.0 [[pime]][c] '''+''' 3.0 [[o2]][c]
+
** 1.0 [[datp]][c] '''+''' 1.0 [[gmp]][c] '''<=>''' 1.0 [[gdp]][c] '''+''' 1.0 [[dadp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H+[c] '''+''' 1.0 Oxaloacetate[c] '''+''' 2.0 H2O H2O[c] '''+''' 1.0 Pyruvate[c] '''=>''' 1.0 Pimelate[c] '''+''' 3.0 O2 O2[c]
+
** 1.0 DATP C10H12N5O12P3[c] '''+''' 1.0 GMP C10H12N5O8P[c] '''<=>''' 1.0 GDP C10H12N5O11P2[c] '''+''' 1.0 DADP C10H12N5O9P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF3127]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 +
* [[EF2595]]
 +
** [[pantograph]]-[[l_plantarum_wcfs1]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''460''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 +
** '''97''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* [[orthology]]:
** [[meneco]]:
+
** [[pantograph]]:
*** [[added for gapfilling]]
+
*** [[l_plantarum_wcfs1]]
 +
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR105223
+
* MetaNetX (MNX) Equation : MNXR100145
{{#set: direction=LEFT-TO-RIGHT}}
+
* EC Number : 2.7.4.8
{{#set: common name=Lumped reaction for synthesis of pime}}
+
{{#set: direction=REVERSIBLE}}
{{#set: in pathway=}}
+
{{#set: common name=Guanylate kinase  GMPdATP }}
{{#set: reconstruction category=gap-filling}}
+
{{#set: gene associated=EF3127|EF2595}}
{{#set: reconstruction tool=meneco}}
+
{{#set: in pathway=map01100|map00230}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}

Revision as of 16:14, 10 January 2018

Reaction GK2

  • direction:
    • REVERSIBLE
  • common name:
    • Guanylate kinase GMPdATP
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DATP C10H12N5O12P3[c] + 1.0 GMP C10H12N5O8P[c] <=> 1.0 GDP C10H12N5O11P2[c] + 1.0 DADP C10H12N5O9P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100145
  • EC Number : 2.7.4.8