Difference between revisions of "DAAOP"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP6 PUNP6] == * direction: ** REVERSIBLE * common name: ** Purine-nucleoside phosphorylase (Deoxy...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTDx GLYCLTDx] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycolate dehydrogenase (NAD)...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP6 PUNP6] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTDx GLYCLTDx] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Purine-nucleoside phosphorylase (Deoxyinosine)
+
** Glycolate dehydrogenase (NAD)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[din]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[2dr1p]][c] '''+''' 1.0 [[hxan]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[glx]][c] '''+''' 1.0 [[nadh]][c] '''=>''' 1.0 [[nad]][c] '''+''' 1.0 [[glyclt]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Deoxyinosine[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 2-Deoxy-D-ribose 1-phosphate[c] '''+''' 1.0 Hypoxanthine[c]
+
** 1.0 H+[c] '''+''' 1.0 Glyoxylate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Glycolate C2H3O3[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF0187]]
+
* [[EF3141]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
−
* [[EF0186]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
+
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
−
** '''83''' reactions found over '''244''' reactions in the full pathway
+
** '''21''' reactions found over '''129''' reactions in the full pathway
−
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''22''' reactions found over '''72''' reactions in the full pathway
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
−
** '''98''' reactions found over '''298''' reactions in the full pathway
+
** '''31''' reactions found over '''163''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''104''' reactions found over '''715''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
 
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27750 27750]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18229 18229]
−
* BioCyc : META:DEOXYINOPHOSPHOR-RXN
+
* BioCyc : META:GLYCOLATE-REDUCTASE-RXN
−
* MetaNetX (MNX) Equation : MNXR103348
+
* MetaNetX (MNX) Equation : MNXR100331
−
* KEGG Reaction : R02748
+
* KEGG Reaction : R00717
−
* EC Number : 2.4.2.1
+
* EC Number : 1.1.1.26
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Purine-nucleoside phosphorylase (Deoxyinosine)}}
+
{{#set: common name=Glycolate dehydrogenase (NAD)}}
−
{{#set: gene associated=EF0187|EF0186}}
+
{{#set: gene associated=EF3141}}
−
{{#set: in pathway=map01100|map00240|map00983|map00230}}
+
{{#set: in pathway=map01100|map00630|map01110|map00620|map01120}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:15, 10 January 2018

Reaction GLYCLTDx

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycolate dehydrogenase (NAD)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 Glyoxylate[c] + 1.0 Nicotinamide adenine dinucleotide - reduced[c] => 1.0 Nicotinamide adenine dinucleotide[c] + 1.0 Glycolate C2H3O3[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:GLYCOLATE-REDUCTASE-RXN
  • MetaNetX (MNX) Equation : MNXR100331
  • KEGG Reaction : R00717
  • EC Number : 1.1.1.26




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