Difference between revisions of "HISTRS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CSPMDDH CSPMDDH] == * direction: ** LEFT-TO-RIGHT * common name: ** Carboxyspermidine dehydrogenase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD3 NTD3] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (dCMP) * Synonym(s):...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/CSPMDDH CSPMDDH] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTD3 NTD3] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Carboxyspermidine dehydrogenase
+
** 5'-nucleotidase (dCMP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[ptrc]][c] '''+''' 1.0 [[aspsa]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[cspmd]][c]
+
** 1.0 [[dcmp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[dcyt]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Putrescine[c] '''+''' 1.0 L-Aspartate 4-semialdehyde[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Carboxyspermidine[c]
+
** 1.0 DCMP C9H12N3O7P[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Deoxycytidine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[EF0062]]
 +
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''508''' reactions found over '''2349''' reactions in the full pathway
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
** '''24''' reactions found over '''149''' reactions in the full pathway
+
** '''82''' reactions found over '''244''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[gap-filling]]:
+
* [[orthology]]:
** [[meneco]]:
+
** [[pantograph]]:
*** [[added for gapfilling]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34111 34111]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29363 29363]
* EC Number : 1.5.1.43
+
* BioCyc : META:RXN0-5292
* MetaNetX (MNX) Equation : MNXR96936
+
* MetaNetX (MNX) Equation : MNXR102033
* KEGG Reaction : R09079
+
* KEGG Reaction : R01664
* BioCyc : META:RXN-11566
+
* EC Number : 3.1.3.5
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Carboxyspermidine dehydrogenase}}
+
{{#set: common name=5'-nucleotidase (dCMP)}}
{{#set: in pathway=map01100|map00330}}
+
{{#set: gene associated=EF0062}}
{{#set: reconstruction category=gap-filling}}
+
{{#set: in pathway=map01100|map00240}}
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:15, 10 January 2018

Reaction NTD3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase (dCMP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DCMP C9H12N3O7P[c] + 1.0 H2O H2O[c] => 1.0 Phosphate[c] + 1.0 Deoxycytidine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-5292
  • MetaNetX (MNX) Equation : MNXR102033
  • KEGG Reaction : R01664
  • EC Number : 3.1.3.5