Difference between revisions of "ExchangeSeed lpam"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK4 NDPK4] == * direction: ** REVERSIBLE * common name: ** Nucleoside-diphosphate kinase (ATP:dTD...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NO2t3 NO2t3] == * direction: ** LEFT-TO-RIGHT * common name: ** Nitrite transport out via proton an...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NDPK4 NDPK4] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NO2t3 NO2t3] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Nucleoside-diphosphate kinase (ATP:dTDP)
+
** Nitrite transport out via proton antiport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dtdp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[dttp]][c] '''+''' 1.0 [[adp]][c]
+
** 1.0 [[no2]][c] '''+''' 1.0 [[h]][e] '''=>''' 1.0 [[no2]][e] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 DTDP C10H13N2O11P2[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 DTTP C10H13N2O14P3[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
+
** 1.0 Nitrite[c] '''+''' 1.0 H+[e] '''=>''' 1.0 Nitrite[e] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1036]]
+
* [[EF3069]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
−
* [[EF0228]]
 
−
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''156''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 
−
** '''83''' reactions found over '''244''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''98''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[e_coli_sstr_k12_substr_mg1655]]
 
−
*** [[l_plantarum_wcfs1]]
 
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
*** [[b_subtilis_subsp_subtilis_str168]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27682 27682]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28979 28979]
−
* BioCyc : META:DTDPKIN-RXN
+
* MetaNetX (MNX) Equation : MNXR101985
−
* MetaNetX (MNX) Equation : MNXR101937
+
* BioCyc : META:TRANS-RXN-26
−
* KEGG Reaction : R02093
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* EC Number : 2.7.4.6
+
{{#set: common name=Nitrite transport out via proton antiport}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: gene associated=EF3069}}
−
{{#set: common name=Nucleoside-diphosphate kinase (ATP:dTDP)}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=EF1036|EF0228}}
+
−
{{#set: in pathway=map01100|map01130|map01110|map00240|map00230}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=b_subtilis_subsp_subtilis_str168}}

Revision as of 16:15, 10 January 2018

Reaction NO2t3

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Nitrite transport out via proton antiport
  • Synonym(s):

Reaction Formula

  • With identifiers:
    • 1.0 no2[c] + 1.0 h[e] => 1.0 no2[e] + 1.0 h[c]
  • With common name(s):
    • 1.0 Nitrite[c] + 1.0 H+[e] => 1.0 Nitrite[e] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR101985
  • BioCyc : META:TRANS-RXN-26




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