Difference between revisions of "PTAr"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHORM CHORM] == * direction: ** LEFT-TO-RIGHT * common name: ** Chorismate mutase * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/5DGLCNR 5DGLCNR] == * direction: ** REVERSIBLE * common name: ** 5-dehydro-D-gluconate reductase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CHORM CHORM] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/5DGLCNR 5DGLCNR] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Chorismate mutase
+
** 5-dehydro-D-gluconate reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[chor]][c] '''=>''' 1.0 [[pphn]][c]
+
** 1.0 [[5dglcn]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadph]][c] '''<=>''' 1.0 [[glcn]][c] '''+''' 1.0 [[nadp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Chorismate[c] '''=>''' 1.0 Prephenate[c]
+
** 1.0 5-Dehydro-D-gluconate[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''<=>''' 1.0 D-Gluconate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[EF1562]]
+
* [[EF0426]]
−
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
−
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
* [[EF2263]]
−
* [[EF1568]]
+
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''508''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''156''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 
−
** '''21''' reactions found over '''59''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''218''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''83''' reactions found over '''228''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[e_coli_sstr_k12_substr_mg1655]]
 
*** [[e_coli_sstr_k12_substr_mg1655]]
−
*** [[l_plantarum_wcfs1]]
 
−
*** [[b_subtilis_subsp_subtilis_str168]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23936 23936]
−
* BioCyc : META:CHORISMATEMUT-RXN
+
* BioCyc : META:RXN-14367
−
* MetaNetX (MNX) Equation : MNXR96708
+
* MetaNetX (MNX) Equation : MNXR95065
−
* KEGG Reaction : R01715
+
* KEGG Reaction : R01740
−
* EC Number : 5.4.99.5
+
* EC Number : 1.1.1
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Chorismate mutase}}
+
{{#set: common name=5-dehydro-D-gluconate reductase}}
−
{{#set: gene associated=EF1562|EF1568}}
+
{{#set: gene associated=EF0426|EF2263}}
−
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655}}

Revision as of 16:16, 10 January 2018

Reaction 5DGLCNR

  • direction:
    • REVERSIBLE
  • common name:
    • 5-dehydro-D-gluconate reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 5-Dehydro-D-gluconate[c] + 1.0 H+[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] <=> 1.0 D-Gluconate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN-14367
  • MetaNetX (MNX) Equation : MNXR95065
  • KEGG Reaction : R01740
  • EC Number : 1.1.1




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