Difference between revisions of "SPMDt3"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NMNN NMNN] == * direction: ** LEFT-TO-RIGHT * common name: ** NMN nucleosidase * Synonym(s): == Re...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1] == * direction: ** LEFT-TO-RIGHT * common name: ** Hydroxymethylpyrimidine kinase (ATP...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/HMPK1 HMPK1] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Hydroxymethylpyrimidine kinase (ATP) |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[4ahmmp]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[4ampm]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 4-Amino-2-methyl-5-phosphomethylpyrimidine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[EF0202]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
| + | * [[EF2775]] | ||
| + | ** [[pantograph]]-[[l_plantarum_wcfs1]] | ||
| + | ** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]] | ||
| + | ** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730] |
| − | ** ''' | + | ** '''11''' reactions found over '''24''' reactions in the full pathway |
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''460''' reactions found over '''2349''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * [[orthology]]: |
| − | ** [[ | + | ** [[pantograph]]: |
| − | *** [[ | + | *** [[e_coli_sstr_k12_substr_mg1655]] |
| + | *** [[l_plantarum_wcfs1]] | ||
| + | *** [[b_subtilis_subsp_subtilis_str168]] | ||
== External links == | == External links == | ||
| − | * MetaNetX (MNX) Equation : | + | * RHEA: |
| − | * EC Number : | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23096 23096] |
| + | * BioCyc : META:OHMETPYRKIN-RXN | ||
| + | * MetaNetX (MNX) Equation : MNXR100664 | ||
| + | * KEGG Reaction : R03471 | ||
| + | * EC Number : 2.7.1.49 | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Hydroxymethylpyrimidine kinase (ATP)}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=EF0202|EF2775}} |
| − | {{#set: reconstruction category= | + | {{#set: in pathway=map00730|map01100}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction tool=pantograph}} |
| + | {{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}} | ||
Revision as of 16:19, 10 January 2018
Contents
Reaction HMPK1
- direction:
- LEFT-TO-RIGHT
- common name:
- Hydroxymethylpyrimidine kinase (ATP)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 4-Amino-5-hydroxymethyl-2-methylpyrimidine[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 4-Amino-2-methyl-5-phosphomethylpyrimidine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map00730: map00730
- 11 reactions found over 24 reactions in the full pathway
- map01100: map01100
- 460 reactions found over 2349 reactions in the full pathway
Reconstruction information
External links
- RHEA:
- BioCyc : META:OHMETPYRKIN-RXN
- MetaNetX (MNX) Equation : MNXR100664
- KEGG Reaction : R03471
- EC Number : 2.7.1.49
