Difference between revisions of "Ptth"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI1 XYLI1] == * direction: ** REVERSIBLE * common name: ** Xylose isomerase * Synonym(s): == Rea...")
(Created page with "Category:Gene == Gene EF0253 == * Synonym(s): == Reactions associated == * ABUTD ** pantograph-b_subtilis_subsp_subtilis_str168 * ALDD1 ** pantograph-...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/XYLI1 XYLI1] ==
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== Gene EF0253 ==
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* direction:
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** REVERSIBLE
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* common name:
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** Xylose isomerase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ABUTD]]
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** 1.0 [[xyl__D]][c] '''<=>''' 1.0 [[xylu__D]][c]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* With common name(s):
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* [[ALDD1]]
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** 1.0 D-Xylose[c] '''<=>''' 1.0 D-Xylulose[c]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD10]]
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== Genes associated with this reaction  ==
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[ALDD11]]
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* [[EF0556]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD12]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD13]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD14]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD15]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD16]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD17]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD18]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD20x_1]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD2x]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD2y]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
 
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[ALDD3]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD31_1]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD32]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD3y]]
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** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
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* [[ALDD4]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD4x]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD5]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD6]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD7]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD8]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[ALDD9]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[GCALDD]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[GLXO1]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[GLYALDDr]]
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** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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* [[LCADi]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
 
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
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== Pathways ==
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* [[SSALx]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** '''460''' reactions found over '''2349''' reactions in the full pathway
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* [[SSALy]]
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* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
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** [[pantograph]]-[[l_plantarum_wcfs1]]
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** '''15''' reactions found over '''54''' reactions in the full pathway
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== Pathways associated ==
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* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
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* [[map00310]]
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** '''22''' reactions found over '''63''' reactions in the full pathway
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* [[map01110]]
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== Reconstruction information  ==
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* [[map01200]]
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* [[orthology]]:
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* [[map00330]]
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** [[pantograph]]:
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* [[map00250]]
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*** [[e_coli_sstr_k12_substr_mg1655]]
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* [[map00350]]
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*** [[b_subtilis_subsp_subtilis_str168]]
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* [[map00410]]
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* [[map00630]]
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* [[map01120]]
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* [[map00650]]
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* [[map00903]]
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* [[map01100]]
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* [[map00561]]
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* [[map00982]]
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* [[map00981]]
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* [[map00980]]
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* [[map00340]]
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* [[map00053]]
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* [[map00680]]
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* [[map00010]]
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* [[map00360]]
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* [[map00071]]
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* [[map00380]]
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* [[map00280]]
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* [[map00760]]
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* [[map00625]]
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* [[map00620]]
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* [[map01130]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: reaction associated=ABUTD|ALDD1|ALDD10|ALDD11|ALDD12|ALDD13|ALDD14|ALDD15|ALDD16|ALDD17|ALDD18|ALDD20x_1|ALDD2x|ALDD2y|ALDD3|ALDD31_1|ALDD32|ALDD3y|ALDD4|ALDD4x|ALDD5|ALDD6|ALDD7|ALDD8|ALDD9|GCALDD|GLXO1|GLYALDDr|LCADi|SSALx|SSALy}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22816 22816]
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{{#set: pathway associated=map00310|map01110|map01200|map00330|map00250|map00350|map00410|map00630|map01120|map00650|map00903|map01100|map00561|map00982|map00981|map00980|map00340|map00053|map00680|map00010|map00360|map00071|map00380|map00280|map00760|map00625|map00620|map01130}}
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* BioCyc : META:XYLISOM-RXN
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* MetaNetX (MNX) Equation : MNXR105253
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* KEGG Reaction : R01432
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* EC Number : 5.3.1.5
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Xylose isomerase}}
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{{#set: gene associated=EF0556}}
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{{#set: in pathway=map01100|map00040|map00051}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|b_subtilis_subsp_subtilis_str168}}
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Revision as of 18:01, 18 March 2018

Gene EF0253

  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/efaecV583/index.php?title=Ptth&oldid=6275"