Difference between revisions of "PBUTT"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GRTT GRTT] == * direction: ** LEFT-TO-RIGHT * common name: ** Geranyltranstransferase * Synonym(s):...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/dtdprmn dtdprmn] == * common name: ** DTDP-L-rhamnose * Synonym(s): == Reaction(s) known to...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GRTT GRTT] ==
+
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/dtdprmn dtdprmn] ==
* direction:
+
** LEFT-TO-RIGHT
+
 
* common name:
 
* common name:
** Geranyltranstransferase
+
** DTDP-L-rhamnose
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
* With identifiers:
+
== Reaction(s) known to produce the compound ==
** 1.0 [[grdp]][c] '''+''' 1.0 [[ipdp]][c] '''=>''' 1.0 [[frdp]][c] '''+''' 1.0 [[ppi]][c]
+
* [[TDPDRR]]
* With common name(s):
+
== Reaction(s) of unknown directionality ==
** 1.0 Geranyl diphosphate[c] '''+''' 1.0 Isopentenyl diphosphate[c] '''=>''' 1.0 Farnesyl diphosphate[c] '''+''' 1.0 Diphosphate[c]
+
* [[CPSS_LPL2]]
 
+
== Genes associated with this reaction  ==
+
Genes have been associated with this reaction based on different elements listed below.
+
* [[EF0981]]
+
** [[pantograph]]-[[l_plantarum_wcfs1]]
+
** [[pantograph]]-[[e_coli_sstr_k12_substr_mg1655]]
+
** [[pantograph]]-[[b_subtilis_subsp_subtilis_str168]]
+
== Pathways  ==
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
+
** '''460''' reactions found over '''2349''' reactions in the full pathway
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
** '''135''' reactions found over '''694''' reactions in the full pathway
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
** '''179''' reactions found over '''1054''' reactions in the full pathway
+
* [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900]
+
** '''14''' reactions found over '''67''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[e_coli_sstr_k12_substr_mg1655]]
+
*** [[l_plantarum_wcfs1]]
+
*** [[b_subtilis_subsp_subtilis_str168]]
+
 
== External links  ==
 
== External links  ==
* EC Number : 2.5.1.10
+
{{#set: common name=DTDP-L-rhamnose}}
* BioCyc : META:FPPSYN-RXN
+
{{#set: produced by=TDPDRR}}
* MetaNetX (MNX) Equation : MNXR99634
+
{{#set: reversible reaction associated=CPSS_LPL2}}
* RHEA:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
+
* Reactome : REACT_R-ATH-191303
+
* KEGG Reaction : R02003
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=Geranyltranstransferase}}
+
{{#set: gene associated=EF0981}}
+
{{#set: in pathway=map01100|map01130|map01110|map00900}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=e_coli_sstr_k12_substr_mg1655|l_plantarum_wcfs1|b_subtilis_subsp_subtilis_str168}}
+

Revision as of 18:17, 18 March 2018

Metabolite dtdprmn

  • common name:
    • DTDP-L-rhamnose
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links